Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0784 ATGGATTCAATGGATTTCAAGGCGAGTGAACTCTTGAAAGAAGTTCAAGTAGATGATTACTCACAGATTTCTAAACCCGTTGATGACGCCGTCGCCGCTATCGAATCTTCCATAGACAGTATCCCTGATAACTATAATGTTACTGCTGATTTGGCACCGAGTTTTGTTAGGGATATTGGTGCTGATAAAGTGGAGTTCAAATTTAAGAAACCATTGGTTATTCAAAAGGGTGGTAGTTACTCTATTGAGAGTCTTGCTAGGCCTGAATTAAATTTGGATCTTATTATAAGGTTACCTAAGGAGTGCTTCCATGAGAAGGATTATTTGAACTACAGGTACCATGCCAAGAGGTGTCTTTATCTCTGCTTGGTGAAAAAGTATTTAGAGAAATCTCCATCTATTGGTAGGGTTGAATGGTCTACCCTGCAGAACGAAGCTCGAAAGCCTGTATTGATTGTGTATCCAGCTGCAAAGCTTGTTGATGTTGATGGTTTTTTTGTGAGAATTATTCCATCGGCCAAGGATATCTTTAGCATACCAAAGTTAAACATGACGCGTAATAACATTCATAATTCAAAGAATGAAGGAAGTTCCGTTCAAGCTACACCAAAGTATAATTCTAGTATTTTAGAAGACATGTATATGGAGGATACAAAATTAATCAACGAATTTTTTCTTGGATGGAAGCAACTAAGAGAGGCTTTAATCCTACTTAAGGTATGGGCTCGACAGAGAAGTTCAATATATGTTCATGATTGCCTGAATGGATTTTTGCTATCCGTCATACTGGCACACCTTGCTTCTAGGCAACAAATTAGTAGGTCAATGAAGGCAATTGAAATAATTCGCATTACCTTGAACTTCATTGCCACTTCAGAGACATGGAGTCGAGGTCTCTACTTTCCAAAGGAAGGCGAAGGAAATATTACTAAAGAGGACAGAATGCAACTTAAAGGGTCATTTCCAGTTGTCATGTGTCATCCATCGGGGGCATTCAATTTGGCTTTTCGAATGTCTAGGATTGGTTTTTCTCAGCTTCAAGACGAGGCTGCTTTGACACTTAAATGCATGGAGAAGTGTAGAGGTGGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAATATGATTATTGTATGAGAATAAACTTTAAGGGAAACAAGGAGCTATATGCATCAGGGTTTTGTATGGATGATGAATGCTGGAGATTGTACGAGGAGAAAATACATGCTATTTTAGCTAAAGGATTGAATGATAGAGCAAAATTTATTCGAGTAATATGGAGAAATGCACAATGCCAGTGGAGCGTGAATGATGGCTTGTCAATTCTTGATAAAGAGCCCTTGTTCATAGGAATTTCAGTCAGTGATTTGGAGAAAGCATTTAGGATGGTTGATATTGGTCCGAATGCTGAAAGTAAAGAACAGGCTCTTGAATTTCGGAAGTTTTGGGGAGAAAAATCCGAGCTTAGAAGATTTAAAGACAGTAGAATTGCAGAAAGCACAGTATGGGAATGTCAGAAATGGGAAAGGCATCTGATTTTGAAAAATATAGCCGAGCATGTGCTTAGTCGGCATCTATCTCTATCCAAGGAAAATATTGTAGTAGTTGTGGATCAACTTGATTTCTCTTTGGCTCATGGTGCTGTAGATCCGATAGCACACTCTGGAAATTTGCTCGAGGCATTTGATCTTCTATCAAAGCGTTTGCGTCTTATTGAAGGCCTCCCTTTGAAGGTGTCTAGTGTACAGCCTTTAGACTCTGCATTCAGGTTTACATCAGTCTTCCCTCCTGAACCTCATCTTCTAGCTAATGAAAAAATTGGATCTCTCAGACTGAATAAGTTGGTTCCATCATGCATTCAACCACTAGAAATTATGATTCAGCTGGAAGGTTCGGGGCACTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAATCTAGTTACCTTATTCAAATAGGAAAAAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCAACTGAGGAAGATGTGGATGTGTTAATGTCAGGATATGCATTTCGTCTTAAAATTTTGCATGAGAGGGCCCTTAGTTTACTCAAAGAAATTGGGAATGATAAAAAAACGCGGGTACATTCGGCAGACAAGAAACTTTTGATTCGTGGTCAACATGCTAGCATGATTAATGGACTACAAAGTCGTTACCCAATATATGGACCAATAGTTAGACTAGCAAAACGTTGGGCTGCTTCACATCTATTTTCTGCTTGTTTGGTAGAGGAGGCCATTGAGCTTTTGGTTGCTTATCTCTTTCTTAATCCTTTGCCATTTAATGCTCCCTGCTCGCGGATCACCGGGTTTATGAGGTTCCTGCAGTTGCTCTCAAACTATGATTGGACTTATTCTCCTTTGGTTGTTGACATAAATAATGACTTGAGCCCGAGTGATAGAAAAGAAATAAATGATAACTTTTTGCTAAGAAGAAAAAGTCAGGGAGAGAATGAGCAAGCTGTAGGGCCAGTGATGTTCTTGGCTACAGTTTATGATAAAGCATCTGAGGCTTGGACTGGATTATCACCTAGTGCACTGGAACTTAAAAGGTTAGTTGCATATGCTCGAAGCAGTGCAAATTTGTTGATGAAACTCACATTTCAGGAGGAAATTGGTCCATACAGATGGGAGTGCCTTTTGCGAACTCCTTTAAATAACTATGATGCAATCATTCTTCTCCACAAGGACAAACTCGCATATCCTCAGAGGCTTCTCTTCTCATCAGAAGTTGGTCACGGAACACAAGTTGCTAAAGGACATGCTGGTAAGTTCTTCCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGTAGGCGGCCTGAGGAACTTAAAAATAAGTTGCTGGTAGACTTTGATCCATCAAGGTGCTTTATCAAAGATTTAGAGAAAGAGTTTTCCACCAAATTCCAATTATGGCGTGATTCTTTAGGAGGCGATGCCATCGGCCTGACGTGGGAGAAATCGTATCCTTCCAAGAAGCGGAAACAAGAGGAAGTGGTCGAGGAAGGATACGACCCTCGGAAGGTGCTAAAAGCTGTAGGTGAAGTTGGAAAAGGGTTTGTGAGAAGTATATACTTTCTCAAGCCACCAAGGCTCGCAAATTAA 3147 0.3988 MDSMDFKASELLKEVQVDDYSQISKPVDDAVAAIESSIDSIPDNYNVTADLAPSFVRDIGADKVEFKFKKPLVIQKGGSYSIESLARPELNLDLIIRLPKECFHEKDYLNYRYHAKRCLYLCLVKKYLEKSPSIGRVEWSTLQNEARKPVLIVYPAAKLVDVDGFFVRIIPSAKDIFSIPKLNMTRNNIHNSKNEGSSVQATPKYNSSILEDMYMEDTKLINEFFLGWKQLREALILLKVWARQRSSIYVHDCLNGFLLSVILAHLASRQQISRSMKAIEIIRITLNFIATSETWSRGLYFPKEGEGNITKEDRMQLKGSFPVVMCHPSGAFNLAFRMSRIGFSQLQDEAALTLKCMEKCRGGGFEEVFMTKIDYAVKYDYCMRINFKGNKELYASGFCMDDECWRLYEEKIHAILAKGLNDRAKFIRVIWRNAQCQWSVNDGLSILDKEPLFIGISVSDLEKAFRMVDIGPNAESKEQALEFRKFWGEKSELRRFKDSRIAESTVWECQKWERHLILKNIAEHVLSRHLSLSKENIVVVVDQLDFSLAHGAVDPIAHSGNLLEAFDLLSKRLRLIEGLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKIGSLRLNKLVPSCIQPLEIMIQLEGSGHWPMDEIAIEKTKSSYLIQIGKSLQKKWGMTCTATEEDVDVLMSGYAFRLKILHERALSLLKEIGNDKKTRVHSADKKLLIRGQHASMINGLQSRYPIYGPIVRLAKRWAASHLFSACLVEEAIELLVAYLFLNPLPFNAPCSRITGFMRFLQLLSNYDWTYSPLVVDINNDLSPSDRKEINDNFLLRRKSQGENEQAVGPVMFLATVYDKASEAWTGLSPSALELKRLVAYARSSANLLMKLTFQEEIGPYRWECLLRTPLNNYDAIILLHKDKLAYPQRLLFSSEVGHGTQVAKGHAGKFFQPFLLPKDLKGRRPEELKNKLLVDFDPSRCFIKDLEKEFSTKFQLWRDSLGGDAIGLTWEKSYPSKKRKQEEVVEEGYDPRKVLKAVGEVGKGFVRSIYFLKPPRLAN* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0784 1048 Pfam Nrap protein PAP/OAS-like domain 231 372 IPR035367 -
Mtr5g0784 1048 Pfam Nrap protein domain 3 376 531 IPR035368 -
Mtr5g0784 1048 Gene3D - 207 375 - -
Mtr5g0784 1048 Pfam Nrap protein domain 6 899 1038 IPR035371 -
Mtr5g0784 1048 Pfam Nrap protein domain 1 93 217 IPR035082 -
Mtr5g0784 1048 Pfam Nrap protein nucleotidyltransferase domain 4 557 730 IPR035369 -
Mtr5g0784 1048 Pfam Nrap protein PAP/OAS1-like domain 5 733 884 IPR035370 -
Mtr5g0784 1048 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 2 1040 IPR005554 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0784 K14544 - gmx:100776157 1731.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0784 5 7718578 7726979 Mtr5g0784 5 7718578 7726979 ECH