Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0771 ATGAAGTGCCCATACTGTTCAGCGGCGCAGGGGCGTTGCACCACAACAACCACCGGAAAATCAATCACAGAATGCACATCATGCGGCCGCGTCGTAGAAGAACGACAATCCCATCCCCACCACATCTTCCACCTGCGCGCCCAAGATAATCCCCTATGCCTCGTCACACCAGATCTCCCTCCCCCCACTCTCAACCAAACCAACACCGATACCAACGAAGAAGAAGACCCATTCGAGCCCACGGGCTTCATAACCGCTTTCTCAACATGGTCATTAGAGCCCAGCCCGCTCTACCTTCAATCTTCCCTCTCTTTTTCGGGCTACCTTGCTGAACTTGAACGAACTCTTGAATCATCTTCTACGAATTCTTCGTCGAGTGTTGTTGTTGATAATCTTAGGGCTTATATGCAGATTATTGATGTTTCGTCGATACTTGGATTGGAATCTGATATTTCTGATCATGCTTTTCAGTTGTTTAGGGATTGTTGTTCTGCTACTTGTTTGAGAAATCGGAGTGTTGAAGCTCTTGCTACTGCTGCTCTTGTTCAGGCTATTCGAGAAGCTCAAGAACCTCGAACCCTTCAGGAAATTTCAATTGCTGCCAATGTGGCACAAAAGGAAATCGGTAAATACATCAAGATACTGGGAGAAGCTTTGCAGCTAAGCCAACCTATTAACAGCAATTCTATATCAGTTCATATGCCAAGATTTTGTACTCTTCTTCAGCTCAATAAATCTGCTCAGGAACTGGCTACTCATATAGGAGACGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCAGCTGCCGCCATATATTTGGCTTGCCAACTAGAAGACAAACGCAAAACCCAGGCTGAAATTTGCAAAGTAACTGGTCTTACTGAAGTCACTCTCCGTAAAGTGTACAAAGAATTACTGGAGAATTGGGATGATTTACTTCCCTCTAATTACACCCCAGCTGTTCCTCCGGAGCGGGCATTTCCCACGACCTTAATTGCTTCTGGGCGTTCTTCAACAACTAAGGTTGATGCTATAGAGGTTACTTCTTCTTTAGATTCAGAAAATTTGCCGGAATTTAAACCAAACAAAGCTAATGAGGCCGAAGGTAAAAGTAATGCTCGTGCAAGCCAATCCACAGCTATTCAACAGTCAACATTTTGGCAATCCCAACTTCCCAGTGCGACCCAGAATCATCAAAATCCAAATGTTTTAGAATCAATGGATATTGATGGGCTGCAGCGCAACCACCAACAACCTGAACCCATGGTAGAGGTCGCAAATGGTGCTGCTATTGGTAGTTCTGTAAACTCAAACCAACTTTACAGTCCTCCTGCGTCAAGTTCAAGCTCTGTTATGAGGTCGCTTTCGGCTCCTCCTTCATCTGCTCCTCCAAATATTCGACACTTGCAATCGTCTAAGACAATGCCTGGTTTTCCAGAGTACTGA 1464 0.4501 MKCPYCSAAQGRCTTTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTPDLPPPTLNQTNTDTNEEEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGYLAELERTLESSSTNSSSSVVVDNLRAYMQIIDVSSILGLESDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSSTTKVDAIEVTSSLDSENLPEFKPNKANEAEGKSNARASQSTAIQQSTFWQSQLPSATQNHQNPNVLESMDIDGLQRNHQQPEPMVEVANGAAIGSSVNSNQLYSPPASSSSSVMRSLSAPPSSAPPNIRHLQSSKTMPGFPEY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0771 487 CDD CYCLIN 134 215 IPR013763 -
Mtr5g0771 487 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 PRINTS Transcription initiation factor IIB signature 178 197 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 PRINTS Transcription initiation factor IIB signature 204 219 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 PRINTS Transcription initiation factor IIB signature 233 251 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 PRINTS Transcription initiation factor IIB signature 267 283 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 PRINTS Transcription initiation factor IIB signature 299 313 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 MobiDBLite consensus disorder prediction 440 487 - -
Mtr5g0771 487 Gene3D - 232 328 - -
Mtr5g0771 487 SUPERFAMILY Cyclin-like 133 223 IPR036915 -
Mtr5g0771 487 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 482 IPR000812 GO:0006352|GO:0070897
Mtr5g0771 487 CDD CYCLIN 234 312 IPR013763 -
Mtr5g0771 487 MobiDBLite consensus disorder prediction 358 388 - -
Mtr5g0771 487 MobiDBLite consensus disorder prediction 440 478 - -
Mtr5g0771 487 Gene3D - 132 223 - -
Mtr5g0771 487 SUPERFAMILY Cyclin-like 230 328 IPR036915 -
Mtr5g0771 487 Pfam Transcription factor TFIIB repeat 134 215 IPR013150 GO:0017025
Mtr5g0771 487 Pfam Transcription factor TFIIB repeat 232 313 IPR013150 GO:0017025
Mtr5g0771 487 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 482 - -
Mtr5g0771 487 SMART cyclin_7 136 217 IPR013763 -
Mtr5g0771 487 SMART cyclin_7 232 313 IPR013763 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0771 K03124 - gmx:102662353 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0771 5 7574145 7578395 Mtr5g0771 5 7574145 7578395 ECH