Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0766 ATGGATTTCGACGACCTAGATGCACCTGTAAAACCTCGGGTCTCGCGGTTTGCGCCAAAATCATCAAAATTCAAACCTAAAAAAGAAGAGCCATCACTCGTTCCCAAATCCGAACCACCGCCACTCGCTTCTGCTAAAACAGAACCACAGGAAATTGATTTAACCGCGCCCACTCCGGTGAAGCATGAACCTAATGCTTCCGTTAAAACTGACGCTGAATCGAAGATTGAAGGTAAAGTTGATTCGAGAAATGTTGATGTGGAAATGACTGAGGCGGTTGATGGTTCTAGAGAAGTTAATCCTATGGATGAAGAGGATACAGTTGTTCGTGAAATTGATGTGTATTTTTCGCCTTCTATTGATAATGACACGAAGTTGTATGTCATGCAATATCCTTTGAGACCATCTTGGCGGCCTTATGATCTTGATGAACAATGTGAAGAGGTTAGGTTGAAACCTGGGACTTCAGAAGTAGAGGTTGATTTATCTATTGATTTGGAGTCATATAATGTTGAAAAAGCCACTGCCGATAAATTGAAATATACAAAGCAGACTCTGTCAACTACGTGGAAGCCGCCTCCTGCAAATGGCTGTGCTGTTGGGCTTCTTATGGGAGATAAGTTGCACCTTCATCCAATTCATGCAGTTGTGCAGCTCCGGCCATCACGACATTATCTCGATTCTGGGGGCTCAGAAAAGAAAAATGTTGCTACGTCAAATAACCAGAATAAGCAGACAACGCCGTCAATGGAGCAAAAGAGTGATGGTGCGCCTTCAATTGAGCAAAAGAGCGACAGTAATCAGTGCTGGGTTCCTCTCGAGTACCATGGTTGCAAGAGTGATATCTCATCTAGATATTTTCAGCAAATGGTTACACACGAAAGTTCTCCCATAAACTTTGAAATGAGCACGTATGACTACATTGCTACACTATGTCCTGGAGTGAGCAGCAACACTTTAGCTAAAGGTCCTTCTAAAAGGTATCTTCTATCATTGCCGGTGGAAAAACGTCTTCAGACATTGCTGATTGAGGGCCCTCCACTTCACCGTTTTAGTGCTATCAAGCACTTTGCTCCTGAATGCTCTGATGACGAACTGCTGAGTGTTCTGGAGAAGCAAGCACAATTGCTGCGGGGTTACTGGGTTCCAAGAAGTAGCTTGCTGTTTCCTACAGGCGGTATAGAAAGTCTGGCAAGAAATTATATCCTTGTAAGGTTTCACAAGAGTTTGACAGTTAAGTCTGATGAGCTGAGAAGGCTCGGTGGCGGTGAACTTGGTAATCGCATGAAACACTTTGTGATGCAATTTGCTTTGGAAAAGTTTGATCTAAAATCCAAAGAAAATTATTGGAAGTTCAAAGAGCTTCCTGACGAGTCCTTCATAAAAGAATTTCCAATTGTTGTTAAAAAACAAGAAGAAATTTTTAAGATCTTGGAAAATGAGGTAAATAGTATTATCGGTACTCTTGGAGGAAAAAGAAAACTTAAAAGTGCTATAACAAACAGTGGTGTCAACAATGCTCTTTTTACATCAACAAATTCTGATCCACGGGCAACAAGTTTGGGTGAAGATCCTCCTAGGAGCATGACCATGTCAAGTGAAACTCGTCATGCTCTGCCAATTGCCCTCAAGAAGCTTTTTCAAACTCACAAAGTTTGCAGCTTCCAATTGATATGCCAAGAATTGCGTGGATTGGCACTTGCCCAAACTATGCTCCCAAAGGGAGGTTCTAAAATGTCTGTCGATGCAGCTAATAGTCTTGATGTTCCACAAGACGAGCTGAAGGCTATCTTGGGTGAAGTTGCATGTGATATCCATGGTTGTTATGTGTTAAAATCAGCACAAAATGATCCATTCAGAGATGTTGTAATTGATATGCTTCGTGGAAGTGGACCCAATGGGAAGCTAAAGAAGGCTGAGATACTTGAAGCTGCAAGGAGAAAACTCGGTAGGGATGTCCCCAACAATGAATATATCAAGGCCGTGAGTGAGTTATGTGTCTCAAAAGGTTCTTTCTGGGTCTTGAAAAGCGGGGATGGAAGTAAGCAATGA 2052 0.422 MDFDDLDAPVKPRVSRFAPKSSKFKPKKEEPSLVPKSEPPPLASAKTEPQEIDLTAPTPVKHEPNASVKTDAESKIEGKVDSRNVDVEMTEAVDGSREVNPMDEEDTVVREIDVYFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVDLSIDLESYNVEKATADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRPSRHYLDSGGSEKKNVATSNNQNKQTTPSMEQKSDGAPSIEQKSDSNQCWVPLEYHGCKSDISSRYFQQMVTHESSPINFEMSTYDYIATLCPGVSSNTLAKGPSKRYLLSLPVEKRLQTLLIEGPPLHRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPTGGIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYWKFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAITNSGVNNALFTSTNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQTMLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHGCYVLKSAQNDPFRDVVIDMLRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGDGSKQ* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0766 683 Pfam RPC5 protein 104 483 IPR006886 GO:0005634|GO:0006351
Mtr5g0766 683 MobiDBLite consensus disorder prediction 225 265 - -
Mtr5g0766 683 MobiDBLite consensus disorder prediction 1 76 - -
Mtr5g0766 683 MobiDBLite consensus disorder prediction 232 265 - -
Mtr5g0766 683 PANTHER DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 100 474 IPR006886 GO:0005634|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0766 Mtr-Chr5 7531551 7542503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0766 K14721 - gmx:100780965 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0766 5 7531551 7542503 Mtr5g0766 5 7531551 7542503 ECH