Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0750 ATGGGATGTCAGTCCAGCAAGGGGATTGATTCAAATACTGATGTCCCAACACCGATTCAAATGGGTGCGCATTCTCTTTATGCGGCCGATTTAAGCTCTTATGAAGCTGCATGTGTTAATGATCCAAACTTGCAATCCTTCGATGCTACCATTCAGGAACGCACCAACAGAGTGATCAACTCTCTTGCTCAAGGGATTGAGGTTCGCTCTATATCGCTTGAGTCGCTAGGTGAAGTTACCGGAAGTCTTCTTGACATGAACCAGGAAGTTGTCAAAGTCATTCTTGAGTGCAAGCAAGATATATGGAACAAGAAGGATCGCGACTTGTTCTCCTTGGTGGAGGATTTTTTTGAGAATAGTCTTCAGACATTGGAGTTTTGTAATGCCCTTGAGAAATGCCTGAAACGAGCGCGTGAAAAACTTGTTGTGGTTAAGTCTGCAATGACTTGTTTTGATGAAGAGGTTCAAAATGGAGTTGAAGGGTCAACTTATGTGAAGACGTTGAAAGGGCTTAAGGATTTCAAGGAAACCGAGGACCCTTTTACGGAAGAGTTTTATTCGTTGTTTCAGTCAGTTTATACTCAACAATCATCAATGCTGAAGAAATTGCTGATTAGAAAGCAAAATCTTGATAAGAAACTGAAATCTCACAAAACATTGAAGAGGGTGTCAAGTGTTATTTTCGTAGCGGCTTTTGTTGCTGTGTTGATTTTCTCAGTTGTGGCAGCAGCAATATCTGCGCCTCCTGTCGTAACGGCTTTGGCTGGTGCATTGGCTGTTCCGATAGGCTCAGTTGGAAAATGGTGCAACTCACTTTTTAAGAAATACGAGACAGCTTTAAAGGGCCAACGAGAAGTAATCAGTTCAATGCACGTTGGTACTTATATTGCACTGGTGGATATGAATAACATTCGGGTTCGTATCAATCAATTGGAAATAAAGATTGAATCCATGGTGCAAACTGCTGATTTTGCTCTTGGCAATGAGGATGCTGTAAAGCTTGCAATCGATGAGATTAAGAAGAAAATAGAAACTTTTGCGGAGATTATTGAGAGTTTGAGTGTGCAAGCTGATCAATGTAGTAGGCAGACTAGGAAAGCAAGGACAGTGGTTGTACAAAAGATAATTAAATACTCTAGTTAA 1143 0.4094 MGCQSSKGIDSNTDVPTPIQMGAHSLYAADLSSYEAACVNDPNLQSFDATIQERTNRVINSLAQGIEVRSISLESLGEVTGSLLDMNQEVVKVILECKQDIWNKKDRDLFSLVEDFFENSLQTLEFCNALEKCLKRAREKLVVVKSAMTCFDEEVQNGVEGSTYVKTLKGLKDFKETEDPFTEEFYSLFQSVYTQQSSMLKKLLIRKQNLDKKLKSHKTLKRVSSVIFVAAFVAVLIFSVVAAAISAPPVVTALAGALAVPIGSVGKWCNSLFKKYETALKGQREVISSMHVGTYIALVDMNNIRVRINQLEIKIESMVQTADFALGNEDAVKLAIDEIKKKIETFAEIIESLSVQADQCSRQTRKARTVVVQKIIKYSS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0750 380 Coils Coil 200 220 - -
Mtr5g0750 380 PANTHER UPF0496 PROTEIN 3-RELATED 1 378 IPR007749 -
Mtr5g0750 380 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 378 - -
Mtr5g0750 380 Coils Coil 301 321 - -
Mtr5g0750 380 Pfam Protein of unknown function (DUF677) 44 375 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0750 Mtr-Chr5 7340243 7342497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0750 - - gmx:100819451 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0750 5 7340243 7342497 Mtr8g2536 8 35759673 35761435 ECH
Mtr5g0750 5 7340243 7342497 Mtr5g0750 5 7340243 7342497 ECH