Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0731 ATGAATTTGATTCCCATTTTTCGTGAATTCAACAAACCAGCATTTCAATTTCGCATTCAAATTCGTTTCTATACACGTCGTCGTGACCCTTTTCCCACAAAAATCACTCACTACCTTAACCGTGCTAAGCTCATCGATTCAATTCGGCTTTCACTACGTTCCAATAACCCTAATTCCACACTCTCCACTCTCATAAACCACCGTTTATTCGACTCATTCGTCCTCACTCACGCTCTTCGTTCTGCCCCTTGTGCAGACTCTGCACTTTCCCTTATTCATACCATTGAGAACACAAAAAGTTCCAATTTTTCACATACCCAAAATACCCTTCATGCTCTTGCTACTGTTCTCGCAAAATCTGGTAAATTGGTTGAGCTCAAATCGCTTATTGATGATATCGAAAGTAAACGGTTTGGTAATGTTAAGATTAGTTTTATGAATTTAATGCAGTGGTATGCTGCAGCTAAGGATATTGATTCTGTTGTTAGGGTTTGGGATCAGTATAGAGTTGAAAGTAGAATAGTGTGTACTGAATCTTATAACATTGTTATGACTCTTTATGTAGAAATGGGTAAGGATTCTGAGGCTGTTGGAATTTTTTGTAAGATGGTTGATGACGGGTCGGTTCCGAATTGTAGAAGTTATAGTATAATAATTGAGCACCTTGTGAAATGTAGGAAGTTTTTGGAAGCTATTGAGGTTTTTAATTTGTTGCCTTTGATGAGGATTAAACGTACTTTGAAACAGTATTCGGTTCTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTAATGAGATGCAAGTTGATGGAATATTACCTAGTCGAACAGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGAATGAGTACAAGGGTGAAAATGAGAATGAAGTTTCACAATGTGATCATGTAGATGGGATCCGCTTAAAACCTTGGCTGGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAATTTTGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAGGTCACCGGATACTGCGTGGAATTTCTTCTGCTGGGTTGCTGATCGACCTGGATTTACTCATAATATATACACAGTACAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTGGTTGATAGACTCATCTTGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGTACCATAAGGTTAATCATTGACTTTTACGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACGATGATCAAATACTTTGTGGGTCTATATCGAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGGAATTCCAATACCCTGGACATGCTTGATGAGATGATTTTAAATGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGACATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGTAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTCCGGTTCCATGCCTGATTCTGCCACCAAAGAGTTGCTAGTGAAAAGCCTCTGGAAAGAAGGGAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGGATTACCTGGTCATGTATGGACTGTCAGCTCTGCAGATCTCACAAGAGTTTATAACATTTATTCAAATAGTTTTGTTTCAAAAGGTGCCTAG 1980 0.396 MNLIPIFREFNKPAFQFRIQIRFYTRRRDPFPTKITHYLNRAKLIDSIRLSLRSNNPNSTLSTLINHRLFDSFVLTHALRSAPCADSALSLIHTIENTKSSNFSHTQNTLHALATVLAKSGKLVELKSLIDDIESKRFGNVKISFMNLMQWYAAAKDIDSVVRVWDQYRVESRIVCTESYNIVMTLYVEMGKDSEAVGIFCKMVDDGSVPNCRSYSIIIEHLVKCRKFLEAIEVFNLLPLMRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFEGICPDERIKSVSFSIDSSDEDENEYKGENENEVSQCDHVDGIRLKPWLDPRSLASALQNWSPDEVSALEGANFVWTTRLVCKILRSFRSPDTAWNFFCWVADRPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFNDDQILCGSISKVNLMLLYSSLLRTLTKCGRNSNTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNSGSMPDSATKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLGLPGHVWTVSSADLTRVYNIYSNSFVSKGA* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0731 659 Pfam PPR repeat 250 278 IPR002885 -
Mtr5g0731 659 Pfam PPR repeat 492 520 IPR002885 -
Mtr5g0731 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 210 IPR002885 -
Mtr5g0731 659 PANTHER OS01G0167750 PROTEIN 19 656 IPR044175 -
Mtr5g0731 659 Gene3D Tetratricopeptide repeat domain 142 346 IPR011990 GO:0005515
Mtr5g0731 659 Gene3D Tetratricopeptide repeat domain 488 628 IPR011990 GO:0005515
Mtr5g0731 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 488 522 IPR002885 -
Mtr5g0731 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 523 557 IPR002885 -
Mtr5g0731 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 558 592 IPR002885 -
Mtr5g0731 659 Pfam PPR repeat family 177 223 IPR002885 -
Mtr5g0731 659 Pfam PPR repeat family 557 604 IPR002885 -
Mtr5g0731 659 TIGRFAM PPR: pentatricopeptide repeat domain 250 281 IPR002885 -
Mtr5g0731 659 TIGRFAM PPR: pentatricopeptide repeat domain 561 593 IPR002885 -
Mtr5g0731 659 TIGRFAM PPR: pentatricopeptide repeat domain 179 212 IPR002885 -
Mtr5g0731 659 Gene3D Tetratricopeptide repeat domain 376 484 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0731 410 640 Glycosyltransferase AT1G05670 26.609 9.53e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0731 - - cam:101514749 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0731 5 7172807 7175924 Mtr5g0731 5 7172807 7175924 ECH