Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0506 ATGTCTTGCTTAGAGTTAGAAGTCTCTAAAGAGAACAAGTTCAAGGAAGAAACAGATTTTGAATCAGAATCAGAAGAGTTGACTCTAGATGGAAGTGTTGATTTCAATGGCCGTCCTGCAATAAGAGCCAAATCTGGAAGATGGTCAGCTGGAACCATTATACTCTTGAACCAATGTCTGGCAACTCTGGCATTCTTTGGGATTGGAGTGAACCTAGTGGTATTCCTGACAAGGGTGGTAGGACAAAATAATGCAGAAGCCGCCAACAACGTGAGCAAATGGACTGGAACTGTTTACATCTTCTCTCTAGTGGGAGCTTTCCTAAGTGACTCTTATTGGGGAAGATATAAAACATGTGCTGTCTTTCAGGTCATTTTTGTAATTGGTCTGATGTCCTTATCGCTGTCATCGTACCTCTTCTTGATTAAACCTAAAGGTTGTGGGAATGAATCAATTCAATGTGGAAAACATTCAAGTTGGGAGATGGGGATGTTCTATCTCTCGATCTATCTCATTGCCTTGGGGAATGGAGGATACCAACCGAATATTGCCACGTTCGGGGCTGATCAGTTTGACGAGGAGCACTCAAAGGAGGGTCACAATAAAGTGGCCTTCTTTAGCTACTTCTACCTAGCTTTGAACTTTGGGCAACTCTTTTCAAACACCATTCTCGTCTATTTCGAGGATGAAGGAATGTGGGCTCTTGGCTTCTGGCTGTCTGCAGGCTGTGCCTTTATCGCACTGATACTGTTTCTTGTTGGCACTCCAAAGTACCGACATTTCAAGCCCAGTGGCAACCCTCTTGCCAGGTTCTGCCAAGTCCTTGTTGCTGCATCAAGGAAAGTTAAAGTTGAAATGCCATCAAATGGAGACGACTTGTACAACATGGATACAAAGGAGTCTTCTACCGATGTGAACAGAAAAATCCTCCACACACACGGGTTCAAGTTCTTGGATAGAGCAGCGATTATATCTTCAAGAGATCATGATAACCAGAAAGGCACCTGTTCCAACCCATGGCGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTCCTTCCGATTTGGCTCTGCACCATAATATACTCTGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGTGATGCCATGAAAACCACTGTTTACAATTTCAGAGTACCACCAGCTAGCATGTCTTGCTTTGATATCATCAGCGTAGCTGTTTTTATTTTCTTCTATCGTCGAATTCTCGATCCATTTGTGGGAAAACTTAAAAAGTCTGATTCAAAGGGACTTACGGAGCTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTAATAGCAATGGTTTCAGCTGGAATAGTTGAATCTTATAGACTTAAGCATGCAGACCAAGACTGCCGCCACTGCAAAGGCTCGAGTACTTTAAGCATCTTCTGGCAAATCCCTCAGTATGCACTTATAGGAGCTTCTGAGGTGTTTATGTATGTAGGGCAGTTAGAGTTCTTCAATGCTCAAACACCTGATGGCTTAAAGAGTTTCGGAAGTGCACTTTGCATGACATCCATTTCCCTTGGCAACTATGTAAGTAGCTTACTTGTCAGTGTAGTTATGAAGATCTCTACGGAGGATCACATGCCGGGGTGGATCCCAGTAAACCTCAATAAAGGTCACCTAGATAGGTTTTACTTCCTCTTAGCCGCCTTGACATCGATGGACTTAATTGCCTATATTGCATGTGCAAAGTGGTACAAGAGTATACAGCTGGGCGAGAAACGCAAAGAGAATGATGAGCCAGGTAGCTTCAAAGTCTAA 1818 0.4323 MSCLELEVSKENKFKEETDFESESEELTLDGSVDFNGRPAIRAKSGRWSAGTIILLNQCLATLAFFGIGVNLVVFLTRVVGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLIKPKGCGNESIQCGKHSSWEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGHNKVAFFSYFYLALNFGQLFSNTILVYFEDEGMWALGFWLSAGCAFIALILFLVGTPKYRHFKPSGNPLARFCQVLVAASRKVKVEMPSNGDDLYNMDTKESSTDVNRKILHTHGFKFLDRAAIISSRDHDNQKGTCSNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGDAMKTTVYNFRVPPASMSCFDIISVAVFIFFYRRILDPFVGKLKKSDSKGLTELQRMGVGLVIAVIAMVSAGIVESYRLKHADQDCRHCKGSSTLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSVVMKISTEDHMPGWIPVNLNKGHLDRFYFLLAALTSMDLIAYIACAKWYKSIQLGEKRKENDEPGSFKV* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0506 605 Pfam POT family 116 544 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g0506 605 CDD MFS_NPF7 48 584 - -
Mtr5g0506 605 PANTHER PEPTIDE TRANSPORTER 22 594 - -
Mtr5g0506 605 SUPERFAMILY MFS general substrate transporter 38 596 IPR036259 -
Mtr5g0506 605 Gene3D MFS general substrate transporter like domains 19 592 IPR036259 -
Mtr5g0506 605 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 594 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0506 Mtr-Chr5 4713207 4718729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0506 1 598 Organic Solute Cotransporters AT1G32450 73.544 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0506 K14638 - gmx:100776457 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0506 5 4713207 4718729 Mtr4g3501 4 48665760 48672153 PCT