Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0505 ATGACAACTATTCATCTTTCTTCCACTACGTCTTCTCTCTTCAAATCTAATAATCTCAATAATCTCTCTTCCTCAAATTTCATCTCATTTCATTCTATTAAGCATCCATCCAAACGCGTCCCCCAAATAACCTCATCCAACCAGTCTCCCACTCTCGGAAATGATTACTACACAAACTCTTCTTCGCTTTATGGTACGTGGCGAACAGGGGAAGGATCAGATGAACGAACTAAAACGAAGATCGTGTGCACGATTGGTCCATCTACTAGCTCACGTGACATGATTTGGAAACTGGCTGAAACTGGAATGAATGTGGCGCGTTTGAACATGTCACACGGGGACCACACTTCCCATCAGAAAGCTATTGATTTTGTTAAACAATACAATTCTCAGTTTCAAGATAGAGTTATTTCCATCATGCTTGACACCAAGGGTCCTGAAGTTAGAAGTGGGGATGTGTCACAACCAATTTTACTCAAAGAGGGGCAAACATTCAATTTTACCATTAACAGGGGGGTTAGCACTCAAGATACTGTTAGTGTCAATTATGATGATTTTGTTAATGATGTCGAGGTTGGAGACGTTCTTCTAGTAGATGGAGGAATTATGTCTCTTGTTGTTAAGTCAAAGACAAAAGACTTGGTTAAATGTGAAGTTATTGACGGTGGAGAATTGAAATCTAGGCGTCATTTGAATGTTCGCGGAAAAAGTGCAACACTTCCTTCCATAACTGAAAAGGACTGGGAAGATATCAAGTTTGGGGTAGACAATGAAGTTGACTTCTATGCTGTTTCATTTGTTAAGGATGCTAGAGTGGTTTATGAGTTAAAAGAATATCTCAAAAGACACAATGCTGATATACATGTGATTGTAAAAATTGAAAGTGCAGATTCCATACCAAATCTTCATTCCATACTTTCAGCTTCAGATGGGGCAATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCGGTTGAAGAAGTTCCTCTACTGCAGGAGGACATCATTAGAAGATGCCACAGAATGCAAAAGCCAGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTATTCATCCCACACCAACTAGGGCGGAAGTCTCAGACATTGCAATTGCAGTAAGACAAGGGGCTGATGCTGTCATGCTTTCAGGAGAAACTGCACATGGAAAATATCCATTGAAATCTGTTAAGGTTATGCATGCGGTGGCTCTAAGGAATGAATCCAGTGTTTTAAGAAGTGATTCTTATCCAAATCATTTGAGCTTCCACAAGAGCCATATGGGAGCAATGTTTGCCTTCCATGCAACAATTATGTCTAATACTCTGAATACTCCTATTATCGTGTTCACCAGAACTGGGTCCATGGCTATTCTTTTGAGTCATTATAGGCCCCACTCAACAATATTTGCATTCACAAATGAAGGAAGGATTAAGCAGAGGTTGGGACTTTATCATAGTGTTATGCCTATATACATGCAATTTTCAAATGATGCTGAGGAGACCTTTGCTAGAGCTCTCAAATTACTATTGATTAAAGGTCACTTAAACGAGGGACAATATGTTACCCTTGTTCAAAGCGGTGCACAACCAATCTGGCGTGAGGAATCCATTCACCACATACAAGTTCGCAAGTCCACAATATTGTAG 1650 0.4018 MTTIHLSSTTSSLFKSNNLNNLSSSNFISFHSIKHPSKRVPQITSSNQSPTLGNDYYTNSSSLYGTWRTGEGSDERTKTKIVCTIGPSTSSRDMIWKLAETGMNVARLNMSHGDHTSHQKAIDFVKQYNSQFQDRVISIMLDTKGPEVRSGDVSQPILLKEGQTFNFTINRGVSTQDTVSVNYDDFVNDVEVGDVLLVDGGIMSLVVKSKTKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNEVDFYAVSFVKDARVVYELKEYLKRHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPVEEVPLLQEDIIRRCHRMQKPVIVATNMLESMIIHPTPTRAEVSDIAIAVRQGADAVMLSGETAHGKYPLKSVKVMHAVALRNESSVLRSDSYPNHLSFHKSHMGAMFAFHATIMSNTLNTPIIVFTRTGSMAILLSHYRPHSTIFAFTNEGRIKQRLGLYHSVMPIYMQFSNDAEETFARALKLLLIKGHLNEGQYVTLVQSGAQPIWREESIHHIQVRKSTIL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0505 549 Gene3D - 78 407 IPR040442 -
Mtr5g0505 549 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 76 411 IPR015813 GO:0003824
Mtr5g0505 549 SUPERFAMILY PK C-terminal domain-like 396 528 IPR036918 -
Mtr5g0505 549 ProSitePatterns Pyruvate kinase active site signature. 287 299 IPR018209 GO:0004743|GO:0006096
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 135 151 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 259 273 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 289 315 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 316 340 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 341 365 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 366 384 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 PRINTS Pyruvate kinase family signature 385 401 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 SUPERFAMILY PK beta-barrel domain-like 146 237 IPR011037 -
Mtr5g0505 549 Pfam Pyruvate kinase, barrel domain 78 412 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 Gene3D - 146 241 IPR015806 GO:0004743|GO:0006096
Mtr5g0505 549 Gene3D - 408 526 IPR036918 -
Mtr5g0505 549 PANTHER PYRUVATE KINASE 53 546 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 TIGRFAM pyruv_kin: pyruvate kinase 78 530 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr5g0505 549 Pfam Pyruvate kinase, alpha/beta domain 447 526 IPR015795 -
Mtr5g0505 549 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 53 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0505 Mtr-Chr5 4706992 4713242 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0505 K00873 - gmx:100776984 803.897