Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0501 ATGAAGGGAAGAAGAGGAAAAAGATCAGAGGCTTTTTGGCCTTCTATTGTGATGAAAAAATGGCTTAATATTAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTTGATACTGAAACTGAGAGTGAAGATGATGTTTGTTCTCCTAAACAACCAAGAATGCAAATTAGTGATGATAGTCCATTTAGAACACAAGGGACTCAATCTATATTCTCAAGTCAAATATCAGATACATCTTTTAAAAAGGGATGCAAAACAAGACACAGAAGAGGAAAATCAGAAACTTTGCGTGCTCAGTATATAAATACTAAGGAAGTGAGGGTAGCAATTGGATCTTGGAATGTTGCTGGAAGACATCCATCTGAGGATCTTGATATTGATGACTGGATTTATGCCGAAGAACCAAGTGATATATACATTTTTGGTTTCCAAGAAGTAGTTCCACTGAATGCTGGAAATGTACTAGGAGCAGAGGATAATACACCTATCCAGAAATGGGAAGCAATCATTAGAAGATCTTTAAACAAATCTTCTGAGCCTGATAGCAAACACAAAAGCCACAGCGCGCCACCTTCGCCGGTGTTGAGAACTTCTTCTGCTGCTGATGTTCTAGCTGATAATATAGATGCTGCTAATCCAATTGATATGCTGAATGATGAGCTCATGGAAAATGTTGACAAATATGATCTGCAACAGCTTGAAGAAAGTAACATAATTAGTATAGGGAATGATTTACACGTGAGGAAAGTTTATGGTATTGATCTTGATTGGCCCGAACGTCCGTTAGACGCAATCTCACAAATTGTTGATTCGAATCCTAAGTTGCGGAGAGTACTAAGTAGTTCAGCAAGAATTGGCTTTGACTTGAATGAGAATGCTTTCTTATATGGCGGCGGTGGTGGAGGTGGATTGAAACGTACGCACCATAGTTCCGGAAATTTGGGCTCGTTATTGAAAGAGCAACAAGTTATACCTAAAGTAGTTGATTCCTTAGATGATGTATCTGAGATGTTATCTGATGATGGTGACGATGCTTTTATTGAATTGCCTGAGAACCAAGACGATGATGAATTAGGCACGACTAAATCACAGGCGAGATATGTTCGGATCATCAGCAAGCAAATGGTGGGAATCTATGTATCTGTTTGGGTGCAGAGGAGGCTGAGAAGACACATTAATAATTTGAAAGTTTCACCTGTTGGAGTTGGTCTTATGGGCTATATGGGAAACAAGGGTTCTGTTTCAATCAGCATGTCACTCTTTCAGTCGCGTATGTGCTTTGTTTGTTCGCATCTGACCTCTGGTACGAAGGATGGAGCTGAACAAAGACGAAACTCAGATGTTAATGAAATTCTCCGACGCACTTGCTTCTCGTCTGTCTTTGCTACAGATCAAGCGCTAACAATCCCATCGCACGATCAGATTTTCTGGTTCGGAGATTTGAATTATCGAATCAGTATGTTAGATTCGGAGGTTCGGAAATTGGTGGCTCAAAAAAAGTGGAATGAACTACTGAATTATGATCAGCTAAGCAATGAATTGCGTGTTGGGCATGTATTTGATGGATGGAAAGAAGGGTTGATAAACTTTGCACCAACTTACAAATATGAAATTAATTCAGATAGATATGTTGGTGAGATACCAAAAGAAGGGGAGAAAAAAAGAGCTCCTGCATGGTGTGATCGAATATTGTGGCTAGGAAAAGGAATAAAGCAACTAAATTATGAACGTGCAGAAATTAAGCTCTCAGATCATAGACCAGTTAGTTCAATTTTCTTGGTTGAAGTTGAAGTATTTGATCATCGCAAATTAAGAAGAGCACTAAATTTCACTAATACTGCTGCAGTACATCCTGAGATTTTTCCTGATGAAGATGGTCAATTTTTCTAA 1890 0.3878 MKGRRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDVCSPKQPRMQISDDSPFRTQGTQSIFSSQISDTSFKKGCKTRHRRGKSETLRAQYINTKEVRVAIGSWNVAGRHPSEDLDIDDWIYAEEPSDIYIFGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSHSAPPSPVLRTSSAADVLADNIDAANPIDMLNDELMENVDKYDLQQLEESNIISIGNDLHVRKVYGIDLDWPERPLDAISQIVDSNPKLRRVLSSSARIGFDLNENAFLYGGGGGGGLKRTHHSSGNLGSLLKEQQVIPKVVDSLDDVSEMLSDDGDDAFIELPENQDDDELGTTKSQARYVRIISKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGTKDGAEQRRNSDVNEILRRTCFSSVFATDQALTIPSHDQIFWFGDLNYRISMLDSEVRKLVAQKKWNELLNYDQLSNELRVGHVFDGWKEGLINFAPTYKYEINSDRYVGEIPKEGEKKRAPAWCDRILWLGKGIKQLNYERAEIKLSDHRPVSSIFLVEVEVFDHRKLRRALNFTNTAAVHPEIFPDEDGQFF* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0501 629 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 623 IPR045849 GO:0004445|GO:0046855
Mtr5g0501 629 Gene3D Endonuclease/exonuclease/phosphatase 328 619 IPR036691 -
Mtr5g0501 629 Gene3D Endonuclease/exonuclease/phosphatase 86 190 IPR036691 -
Mtr5g0501 629 Coils Coil 626 629 - -
Mtr5g0501 629 SMART i5p_5 325 600 IPR000300 GO:0016791|GO:0046856
Mtr5g0501 629 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 623 - -
Mtr5g0501 629 MobiDBLite consensus disorder prediction 175 196 - -
Mtr5g0501 629 MobiDBLite consensus disorder prediction 30 66 - -
Mtr5g0501 629 Pfam Endonuclease/Exonuclease/phosphatase family 112 585 IPR005135 GO:0003824
Mtr5g0501 629 SUPERFAMILY DNase I-like 97 610 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0501 Mtr-Chr5 4681791 4685920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0501 367 565 Acyl Lipid Metabolism Gene Families AT1G05630 35.398 3.11e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0501 K24221 - ccaj:109800886 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0501 5 4681791 4685920 Mtr4g3503 4 48695385 48707400 PCT