Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0500 ATGGTGTGCTGTAGAGGCTTTTGGGAGTGCCTTTTGAAGCTTTTAAACTTCATATTGACCGTGACTGGTTTAGCTATTGTGGGTTATGGGATCTATTTGCTGGTTGCATTCGCTAAAGCCTCTGATGACGATAAACCCGACATTTCTCCAACGCCAGATATTTCTCCGGTCAGTGGTGATAGTGCTCTAATTCAGTTTGGGCGGCCGATGCTTATGGCTGTCTCTCTATCCGACAACATTTTTGACAAGTTGCCTAAGGCTTGGTTTATTTACTTATTTATTGGTGTCGGAGCTGTTCTCTTTGTTGTTTCTTGTTTTGGTTGTATTGGAGCTACGACACGGAATGGTTGCTGCCTGATTTGTTATTCAATTTTAGTGGCACTGTTGATCTTGGTAGAGCTGGGATGTGCAGCCTTTCTATTCTTTGACAAAAGCTGGAAAGAGGAAATTCCAACAGATAAAACTGGAGATTTTGATATGATATATGGGTTTCTCAGAGAGAATTGGGATATTGTGAGATGGGTTGCTCTTGGGATTGTTATCTTTGAGGCTCTTCTTTTCTTGTTAGCCCTTATTGTTAGGGCTGTAAATAGGCCAGCAGATTATGATAGTGATGATGAGCTCATTAATCCAAGGCAACAAGTTCGGCAGCCATTGCTCAATAATAGACAAGCAGGTCCACCATCAGGGTTACCAGTTGCAGGGACAACGGACCAGCGCCCAAACAGAAATGATGCATGGAGTACACGGATGAGGGAGAAGTATGGGCTTGATACTTCAGAATTTACGTACAATCCATCCGAGTCACAAAGGTTCCAGCAAGCAAACTCTCAGCCAACCGAAGAAAAGAGCCGCTGCACCATCATGTAA 870 0.4345 MVCCRGFWECLLKLLNFILTVTGLAIVGYGIYLLVAFAKASDDDKPDISPTPDISPVSGDSALIQFGRPMLMAVSLSDNIFDKLPKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYSILVALLILVELGCAAFLFFDKSWKEEIPTDKTGDFDMIYGFLRENWDIVRWVALGIVIFEALLFLLALIVRAVNRPADYDSDDELINPRQQVRQPLLNNRQAGPPSGLPVAGTTDQRPNRNDAWSTRMREKYGLDTSEFTYNPSESQRFQQANSQPTEEKSRCTIM* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0500 289 PANTHER TETRASPANIN 3 260 IPR018499 GO:0016021
Mtr5g0500 289 MobiDBLite consensus disorder prediction 263 289 - -
Mtr5g0500 289 MobiDBLite consensus disorder prediction 220 250 - -
Mtr5g0500 289 Pfam Tetraspanin family 10 146 IPR018499 GO:0016021
Mtr5g0500 289 PANTHER TETRASPANIN/PERIPHERIN-RELATED 3 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0500 Mtr-Chr5 4664294 4671109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0500 - - mtr:MTR_5g014080 586.645