Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0496 ATGGATGACATACCAGGATATGTACGTTACTGTTTCAACACAGGGAAGCTTCTCTTTTTGGCACTTTTGGTCTCAGGAGGAATCGTCTTACAAATTTTGGCATGTGCTTTGTATAATAATTGGTGGCCGATGCTTAGTGCTATAACATATGTGCTTCTTCCAATGCCGTTGCTGTTCTTCGCTGGGTCTGATGGTTCTTCTATGTTTTCTGAATCTGATAATAGCTGGGTGAATTTCGGCAAGTTCTTGACCGGAGCCTCAACTCTCGGAGGCATTGCAATTCCAAGCATATTAATACATGCTGGTGTGATCGGCTGGGCAGCCTTTGCATTGGAACTCTCTTCTTTCTTTGTGTTCGTATTAGCCATTTTGTGTTTCCTGTGGATGAGTGATGAAGATAGTTACAGTATGCTATGA 417 0.4245 MDDIPGYVRYCFNTGKLLFLALLVSGGIVLQILACALYNNWWPMLSAITYVLLPMPLLFFAGSDGSSMFSESDNSWVNFGKFLTGASTLGGIAIPSILIHAGVIGWAAFALELSSFFVFVLAILCFLWMSDEDSYSML* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0496 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 135 - -
Mtr5g0496 138 Pfam Vacuolar protein sorting 55 18 133 IPR007262 -
Mtr5g0496 138 PANTHER LEPTIN RECEPTOR-RELATED 1 135 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0496 Mtr-Chr5 4623590 4626084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0496 1 135 EF-hand Containing Proteins AT1G32410 67.647 1.22e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0496 - - gmx:100500037 231.491