Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0482 ATGGCTACTTCTTCTAAAAGACACTGTTTCTTGAACGATGAAGAAGACGATGGTTTGGCTTCAATTACAACAACAGACATTGAACCTGGCTTTTCTGGTCACAATCATTTCTCTCATCAACACGGTTTCGTTTCAAGAACTTTAGGTTACGGTTACGCAACTGTTTACAATAGAGGTCTCAGAAACAACGCTAATTCTCCTAGATCTGGTGGTAGATTTTATGATGCTAGATTTGAAGATCATCAACCTCACTTTCTTCAATCTTGTTTTCTTTGCAAAAAGGCTTTGGGAAACAAAGATATCTTCATGTACAGAGGGGATACACCTTTTTGTAGTGAAGAGTGTAGACAAGAACAAATAGAGATTGATGAAGCGAAAGAGAAGAATATGAACATTGCTTCATCAATGGCTTTGAGAAAAAAAGAGCAAAGAAAATCTTCATCACCAAACAAAGCACAAGATTACTCTTTTCGTACAGGGACGGTTGCTGCTGCTTAA 498 0.3755 MATSSKRHCFLNDEEDDGLASITTTDIEPGFSGHNHFSHQHGFVSRTLGYGYATVYNRGLRNNANSPRSGGRFYDARFEDHQPHFLQSCFLCKKALGNKDIFMYRGDTPFCSEECRQEQIEIDEAKEKNMNIASSMALRKKEQRKSSSPNKAQDYSFRTGTVAAA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0482 165 ProSiteProfiles Zinc finger FLZ-type profile. 84 127 IPR007650 -
Mtr5g0482 165 Pfam zinc-finger of the FCS-type, C2-C2 76 126 IPR007650 -
Mtr5g0482 165 MobiDBLite consensus disorder prediction 131 165 - -
Mtr5g0482 165 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 16 165 IPR044533 -
Mtr5g0482 165 PANTHER - 16 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0482 Mtr-Chr5 4441877 4443056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0482 - - gmx:100797178 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0482 5 4441877 4443056 Mtr5g0482 5 4441877 4443056 ECH