Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0474 ATGGATTTCACGGGGAAGGACCTTTTCGGCGAAGATTCCGACAATGATAAAGATGGGACCCACTCTTCTTCTTCGTCTTCTTCTTCCTCCGCTGCTTCATCTTCCTCTTCTTCTTCATCTTCCGCAGCTTCTTCCTCCAAAGGTTCCGCAGATTCCTCTTCCGATACCGGAAGCGGAGCTAGTAGCGGCGGTGGCGGTGATGATGAAGAAAACGGTGATGTTGTTGATAGTAGTAATAGGGTTGATTCTCATCATGATGATGATCATGATGATAGAGATCTGTTTGGTGATGATAATGAAGATTATTGTAAAACCCTTGCTAAAAGTCCTTACCCTATTCCTGTATTGCCTCCCATCCGCAACAATACGAACAACCCGGGAAGAGGGGGTGGTGGACGTGGTCGTTGGCAACAAGGGCAGCATAATGATAGAGGAGCTGGCATTCTTCCGCGTCCTGGACCTTATCCTCAGAGGCAGAATTTTGGGTATGGTAATAGGTTTCAGAATGGCCACCGCGATGAACGTTTTGTCTCTGAAATGAAGCTCTCGAAAAGTGAAGAAACTCTGTCAAGAAAGGTTATTGCTTTTCAAGAGCCTTGTGAACTTGCCTGCTATAGTCGTGCAGAAGGCGGGGAAGTGTATTTTGACGATCGTAGCTTGAGACTTTTTAAACGCCATATCACTGAAGATATTGGAGCTGATTTGAACGAAGGATATGATACATACATTCCCAAAAAAGACTTAGGCTCAGAAGGTTATGGTGATCTTCTTGCTTGCATCAGAGATAAAAAAATCCATCTTCAAAACATCCATTTTGTGACGTACCGCAACAATCTGAACAAGATACTTGCTACAGCTTATATTCGCCATGAGCCTTGGGAAATGGGAGTACACAAAAGGAATGGTGTTGTCTATCTCGATGTGCACAAGTTACCAGAAAGACCGCAAAGTGATTTAGATCGCAGGAGATGTTATCTGGGTTACTCTTTTGAGAGCCTTGCCACCGAAGATCCTAAAAGAGCAGATGGAGAGCCGATACACGATGTTGATGCCAATGTTGAATTTTGTTCTGTGATTAAGACAAAATTGGGTGCTCACCGTATCTTGATGGGTGCTGAGATGGATTGCTGTGATACGACTACTGATGGGAAGAGATTTTATGTGGAGTTAAAGACAAGTTACGAGTTGAATTATCATAATGAGGAAAAATTTGAGAGAGAGAAACTGCTAAAGTTTTGGATTCAGTCATTCCTGGCAGGCGTTCCATATATTTGTATAGGATTTAGGGATGATGCAGGCCGTCTTGTTCGGACTGAAATGCTTAGAACCAAAGATATTACGCAGAGAATAAAAATGAAGGGCTACTGGCAGGGTGGAGTCTGCCTGGCGTTTGCGGACGAGGTATTATGCTGGCTTTATGGAACAGTCAAAGAAAATGAAGATTACATATTGCAGTTCGCGCCACCTTTCAACCGTTTGGAACTTCTGCAAGCTCACTCGTGTCCAGATGTAATAACAAGTCACCTGGAACTGTTGTGA 1539 0.4366 MDFTGKDLFGEDSDNDKDGTHSSSSSSSSSAASSSSSSSSSAASSSKGSADSSSDTGSGASSGGGGDDEENGDVVDSSNRVDSHHDDDHDDRDLFGDDNEDYCKTLAKSPYPIPVLPPIRNNTNNPGRGGGGRGRWQQGQHNDRGAGILPRPGPYPQRQNFGYGNRFQNGHRDERFVSEMKLSKSEETLSRKVIAFQEPCELACYSRAEGGEVYFDDRSLRLFKRHITEDIGADLNEGYDTYIPKKDLGSEGYGDLLACIRDKKIHLQNIHFVTYRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYLGYSFESLATEDPKRADGEPIHDVDANVEFCSVIKTKLGAHRILMGAEMDCCDTTTDGKRFYVELKTSYELNYHNEEKFEREKLLKFWIQSFLAGVPYICIGFRDDAGRLVRTEMLRTKDITQRIKMKGYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFNRLELLQAHSCPDVITSHLELL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0474 512 MobiDBLite consensus disorder prediction 1 152 - -
Mtr5g0474 512 MobiDBLite consensus disorder prediction 1 19 - -
Mtr5g0474 512 PANTHER BNAC01G10220D PROTEIN 19 512 - -
Mtr5g0474 512 Pfam RAI1 like PD-(D/E)XK nuclease 374 436 IPR013961 -
Mtr5g0474 512 MobiDBLite consensus disorder prediction 73 104 - -
Mtr5g0474 512 PANTHER DOM-3 RELATED 19 512 IPR039039 -
Mtr5g0474 512 MobiDBLite consensus disorder prediction 20 61 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0474 K14845 - gmx:100798780 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0474 5 4342280 4348041 Mtr5g0474 5 4342280 4348041 ECH