Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0466 ATGGTTCTTCAATTCCACGAACACATAATCACAGAGCTTCTAGAAGACACCAATGGCGGCCTCACAATTCTCTCATCAGGTCTCTCCTTATCAAAACTCATCTCATCTCTTCTCCTTCTCCACTCTTCTTCACAGGGCACTCTTCTCATTCTCTCTCCTTCTCCAACTCTCAAATCCAAAATCAATTTCCATCTCAAAACCCTAAACCCCCAACTTCACCAAATCCCGACAGAAATCACTGCCGATCTCCCCGTTAACCACCGTCACTCTCTCTATTCCTCCGGCCACGTTTGTTTCATCACTCCTCGAATCCTCATCGTCGATCTTTTAACAAACAAACTCCCTACATCAACAATCTCCGGTATGTTAATCCTCAATGCACATTCAATTTCCGAAACTTCCACCGAAGCGTTTATTGTAAGAATTTTCCGTTCGTTTAATCGCGATGCGTATGTTAGAGCATTTTCTGATCGTCCTCAGGCGATGGTTTCTGGTTTTGCGAAGGCGGAGAGGACGATGAAGTGTTTAGGGTTACGGAAGTTACATTTATGGCCGAGATTTCAGGTTTATGTGAGTCAAGAGCTTGAGAGGGATCCACCGGATGTGGTGGATATTAGGGTTCCGATGACGAAGTATATGGTGGGGATTCAGAAAGCTATTGTCGAGGTTATGGATGCGTGTTTGAAAGAGATGAGGAAGACGAATAAGGTTGATGTGGAGGATTTGACTGTGGAGAATGGGTTGTTTAAGTCGTTTGATGAGATTGTGAGGAGACAGTTGGATCCAATTTGGCATACTTTGGGGAAGAAGACTAAGCAGCTTGTTTCTGATCTTAAGACGTTGAGGAAGTTGTTGGATTATCTAGTCAGGTATGATGCGGTGACTTACTTGAAATATTTGGATACACTCAGAGTGTCGGAAAGTTTTCGTTCGGTTTGGATATTTGCAGAGGCAAGCTATAAGATATTTGACTATGCAAAGAAACGTGTTTATCATCTTGTGAGATCAGATGGTGTGAAATTGAACGAGTCTAGTAAGAATGTCAAAAACAAAAAGAAAAAAGCCAAGGGGGATAACGAAGACACCGAAGAAGCTGATGTCACTGCCTCAACCAGTTCAAATCATGGCATAGTATTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGATATCCTTGAAGAGGTAGAGGAGGAAAGACGAAAGCAAGGCATTTTGAGGGAAGAAGTCTTGGCTGAAGGTGAAGACACCGACAATGGCATTGTATTGGTGGCATGTAAAGATGAAAGGTCATGCTTGCAGCTTGAAGAATGCATCACCAACAATCCGAAAAAGGTCATGCAAGATGAATGGAAGAAGTACTTACTGAACAAAGTACAACTGCGTGATGTAGTGCATAAGAAAAAGAAGCCAAAGGATCCTAAGGGTTTTGGGATTCTTAATGGAGTCACTCCCATATCCCTTGCACAGAATACAGAAACTGGCGGCATCAATAAGCAGGAGCATGATGCACTTCTGGCAGCAGCTTCAAAACTGCGAAATCTTGCTGAAAAAAATCATGTTGTTGAAGATACTCCTCAGTCTGATTTGGGTGGACATGTTCGTGGAAAAGGCAAGAGAAAATTGGGGAATAGAAATGGCCCAATCATTATTGATGGCTCTGGTGTTCAGAGTAACAATAAGGAGGAAGTGACAAGTGGCAAAACTGGGATGTCCGATTCAAAAAATAAAGCCCACATGGGTGAAACTAGTGCTGTCAGTACTGATAGAGTTTGTGAAACCAAACACGGGGGGATATCTGTAGACGATGCAGTTCTTCGGAGGCATACCTTTCCTGATGCCATGGCAAGAGATGGGAAGCCACTACCGCCAGTACATTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGACATATTAAAGCCCTCTATAATCGTCGTTTACCATCCAGACATGACCTTTGTAAGAGAAATCGAAGTCTACAAAGCTGAGAACCCCTCTAAAAGGTTAAAGGTATACTTTATTTTCTATGAAGATTCTACCGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGACAAAAATCTATGATGATGATTCCAATTGACCAGAGTGGGCATGGTTTAGGATTTAATTCTACCCTAGATTCAGATTTAAATACTACCCAGAACTCAATAACCAGAAAAGCAGGTGGGAGAAAGGAGGTTGATAAAGAAATGCAGATCATTGTGGACATGCGGGAATTCATGAGCAGCCTTCCAAATATTCTTCATCAAAAGGGAATGCGCATAATTCCGGTGACCCTTGAAGTTGGTGACTATATCCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAGGATCTCTTCCAGAGTTTCACATCAGGTCGTCTATACAACCAGGTGGAAACAATGGCGCGATATTATAAAATACCAGTGCTCTTGATAGAGTTTTCACAGGATAAGAGCTTCTCATTTCAGTCTGCCAGTGATATTGGTGATGATGTGACACCCAATAGCATTATATCAAAGTTGTCATTACTTGCTCTACATTTTCCCCGGCTACGTATAATCTGGTCTCGAAGTTTGCATGCAACTTCTGAAATATTTGCTTCACTAAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTCCCCTCAGAAGAAGGAATTGTGGAAAGTGACGTGAGGGCTGAAAATTACAACACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGATTCTAATTATAGGGCCATAATGGATGGGTGTAAAAGTTTGGCAGAACTTGCACTTCTTCCGGTAGAAAAGCTAGCTGAAATAATGGGTGGTCATAAAGCTGCTCGTACCCTTAGAGACTTTCTAGATGCTAAATATCCCACTTTGTTGTGA 2955 0.4203 MVLQFHEHIITELLEDTNGGLTILSSGLSLSKLISSLLLLHSSSQGTLLILSPSPTLKSKINFHLKTLNPQLHQIPTEITADLPVNHRHSLYSSGHVCFITPRILIVDLLTNKLPTSTISGMLILNAHSISETSTEAFIVRIFRSFNRDAYVRAFSDRPQAMVSGFAKAERTMKCLGLRKLHLWPRFQVYVSQELERDPPDVVDIRVPMTKYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGVKLNESSKNVKNKKKKAKGDNEDTEEADVTASTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERRKQGILREEVLAEGEDTDNGIVLVACKDERSCLQLEECITNNPKKVMQDEWKKYLLNKVQLRDVVHKKKKPKDPKGFGILNGVTPISLAQNTETGGINKQEHDALLAAASKLRNLAEKNHVVEDTPQSDLGGHVRGKGKRKLGNRNGPIIIDGSGVQSNNKEEVTSGKTGMSDSKNKAHMGETSAVSTDRVCETKHGGISVDDAVLRRHTFPDAMARDGKPLPPVHFYALESDQPILDILKPSIIVVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPIDQSGHGLGFNSTLDSDLNTTQNSITRKAGGRKEVDKEMQIIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFQSFTSGRLYNQVETMARYYKIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVESDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAEIMGGHKAARTLRDFLDAKYPTLL* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0466 984 MobiDBLite consensus disorder prediction 527 593 - -
Mtr5g0466 984 MobiDBLite consensus disorder prediction 345 371 - -
Mtr5g0466 984 SMART ERCC4_2 753 833 IPR006166 GO:0003677|GO:0004518
Mtr5g0466 984 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 980 - -
Mtr5g0466 984 MobiDBLite consensus disorder prediction 345 363 - -
Mtr5g0466 984 MobiDBLite consensus disorder prediction 554 593 - -
Mtr5g0466 984 SUPERFAMILY RuvA domain 2-like 915 979 IPR010994 -
Mtr5g0466 984 Coils Coil 345 365 - -
Mtr5g0466 984 Gene3D - 753 899 - -
Mtr5g0466 984 SUPERFAMILY Restriction endonuclease-like 750 888 IPR011335 -
Mtr5g0466 984 Coils Coil 392 412 - -
Mtr5g0466 984 Pfam ERCC4 domain 756 885 IPR006166 GO:0003677|GO:0004518
Mtr5g0466 984 Gene3D - 911 982 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0466 K10848 - gmx:100812359 1595.87