Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0456 ATGGCTTCTCAAGTTTTACTTCAGGCTCTGTTTTCCCCAATTCAATGTCCTCCTTCGAAGCTATGTTTCACTTCTTCTTGCACCGCTTCCACATTCGGTTCTCGTAACTTGCCGTTGATTTCTACCTCAATTTCACGGCGTTGCAGTCCTCTCATTGCTAAACCTAGTTTTGTTGTCAGAGCTGATTCCAATTCCGACGCTGTTTCCGCTTCGGATAATGTTGATGAAAATCCTGAAGCTTCGGATAATGTTGATGAAGTTCCGGAAACTGAAGGAGAACAGATTTTGGATTCTGCATCTGAGGTGGAGGAATCCAAGCCTCCTAGACAAACTCGTGTTAAGCTTGGTGATGTTATGGGGATATTGCATAAGAGGGCAATTGCAGCTTCAGATGAAGTGAGGACCACTCCTGACCTAAGGACTGGAGATATTGTGGAAATCAGATTGGAAGTTCCGGAGAACAAACGTAGGTTATCCATTTATAAAGGTATTGTCATCTCAAGACAAAATGCTGGTATTCACACGACTATTCGCGTCCGAAGAATTATTGCCGGCACAGGGGTCGAGATAGTCTTCCCAATTTACTCACCAAACATCAAAGAAATCAAAGTGGTAAAGCACCGAAAGGTCAGGCAGGCAAGACTGTACTATCTAAAAGACAAGCTTCCCAGATTCTCCACTTTCAAATGA 690 0.4348 MASQVLLQALFSPIQCPPSKLCFTSSCTASTFGSRNLPLISTSISRRCSPLIAKPSFVVRADSNSDAVSASDNVDENPEASDNVDEVPETEGEQILDSASEVEESKPPRQTRVKLGDVMGILHKRAIAASDEVRTTPDLRTGDIVEIRLEVPENKRRLSIYKGIVISRQNAGIHTTIRVRRIIAGTGVEIVFPIYSPNIKEIKVVKHRKVRQARLYYLKDKLPRFSTFK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0456 229 MobiDBLite consensus disorder prediction 67 91 - -
Mtr5g0456 229 TIGRFAM rplS_bact: ribosomal protein bL19 134 221 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mtr5g0456 229 Gene3D - 100 228 IPR038657 -
Mtr5g0456 229 PANTHER RIBOSOMAL PROTEIN L19 5 229 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mtr5g0456 229 SUPERFAMILY Translation proteins SH3-like domain 129 229 IPR008991 -
Mtr5g0456 229 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 5 229 - -
Mtr5g0456 229 Pfam Ribosomal protein L19 132 222 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mtr5g0456 229 PRINTS Ribosomal protein L19 signature 123 152 IPR001857 GO:0003735|GO:0005840|GO:0006412
Mtr5g0456 229 PRINTS Ribosomal protein L19 signature 182 205 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0456 Mtr-Chr5 4197480 4201030 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0456 K02884 - gmx:100305649 274.248