Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0442 ATGCTAAGAGTTCCCAACGACCTCTCTTTCTTTCTTTGTTTGTTGTCTTGTCTTCCGTGGCAGCAACAAACAAGTTGTAGCAGTTTCACGATGATGCTTCTACTTCGTCTTCCTCCCTTGTCCTTTCTCTTCATCTTCTTCTTCTTCTTCTTCTTCCCCATTTCACACTCAATTCCCTTCATTGTCCTTCACGGAATTGGAGATCAGTGTTCTAACCGTGGAGTCAAATCATTCACACAAGAATTGATCACATACTCTGGTGTTAAGGGATTCTGCGTAGAGGTAGGCAATGGATCATGGGATTCATGGTTTATGCCTTTGAAAGAACAGACAGATGTTGTTTGCCAGAAGGTGAAGAAAATGAAAGAGTTGAAGGGAGGATACAACATTGTTGGCCTCTCCCAGGGAAATTTAATTGGTCGAGGTGTGGTCGAGTTTTGTGAAGGAGGACCTCCCGTTAAGAACTTCATCTCTTTAGCAGGCCCTCATGCTGGTACTGCTTCGGTTCCCCTCTGTGGTACAGGTATCTTTTGTGTCCTTGCAGACAATCTCATCAAGGGAGAGGTGTACAGTAACTATATTCAAGAACACTTGGCTCCTAGCGGATATCTAAAATTACCAAATGCCATACCTAAATATTTGGAGAACTGTAGGTACCTCCCTAAGCTTAATAATGAAAAACCCGGTCAGAGGAATTCCACTTACAAGGAAAGATTCAGTAGCTTAGAGAATTTGGTACTTATCATGTTTGAGCAAGACACAGTTTTAATACCGAGAGAAACATCCTGGTTTGGTTATTATCCAGATGGCTTCTTCAAGCCAGTTCTACCACCACAAGAGACAAAACTCTACACTGAAGACTGGATTGGCTTAAAAACTTTAGACGAAGCTGGCCGTGTCCATTTCATTAGCGTTCCTGGAAAGCATCTAGGGATATCCGAGGCGGATATGAAGAAACATGTAGTGCCATATTTGAACGGCAAAACGTCAAGAAATGATAGCACCACTAAGGCTGGCTTTCGGAGGATGCGTGGATTTAATCAAAGATTTATTCATATCAACAAGATGGAGTAA 1074 0.4227 MLRVPNDLSFFLCLLSCLPWQQQTSCSSFTMMLLLRLPPLSFLFIFFFFFFFPISHSIPFIVLHGIGDQCSNRGVKSFTQELITYSGVKGFCVEVGNGSWDSWFMPLKEQTDVVCQKVKKMKELKGGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGTGIFCVLADNLIKGEVYSNYIQEHLAPSGYLKLPNAIPKYLENCRYLPKLNNEKPGQRNSTYKERFSSLENLVLIMFEQDTVLIPRETSWFGYYPDGFFKPVLPPQETKLYTEDWIGLKTLDEAGRVHFISVPGKHLGISEADMKKHVVPYLNGKTSRNDSTTKAGFRRMRGFNQRFIHINKME* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0442 357 Gene3D alpha/beta hydrolase 53 337 IPR029058 -
Mtr5g0442 357 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 40 341 - -
Mtr5g0442 357 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 40 341 - -
Mtr5g0442 357 Pfam Palmitoyl protein thioesterase 59 309 - -
Mtr5g0442 357 SUPERFAMILY alpha/beta-Hydrolases 55 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0442 Mtr-Chr5 4076871 4082003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0442 51 338 Acyl Lipid Metabolism Gene Families AT3G60340 68.403 5.50e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0442 K01074 - gmx:100809770 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0442 5 4076871 4082003 Mtr5g0442 5 4076871 4082003 ECH