Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0414 ATGGCGGGAATGATTGCAGCGACAGGGTCGTGTGTTTTCTGTAACATAGCCACCAAATCCAACTCCAATACCATTCTCCACTCTGATGATAAGGTTGTTGCTTTTCGGGATATTAATCCATCTGCTTTCAGGCATTACTTAGTGGTTCCTGTGGAGCACATTCCTACTGTTAAAGATCTTCAGAGAAGAACTGAAGATTATTCTTTGGTGAGTCATATGTTAGATGTGGGGAAAATGTTATTAGTCAGAGATGCACCTCACTCAAAGCAATACAGATTTGGCTTTCATCAACCTCCACTGAATTCTGTTAACCACCTACACCTCCATTGTATGGCGCTACCATATACACCCAGGGATAATATGAACATTTACTTTGGGAATGAGTAA 387 0.4109 MAGMIAATGSCVFCNIATKSNSNTILHSDDKVVAFRDINPSAFRHYLVVPVEHIPTVKDLQRRTEDYSLVSHMLDVGKMLLVRDAPHSKQYRFGFHQPPLNSVNHLHLHCMALPYTPRDNMNIYFGNE* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0414 128 ProSiteProfiles HIT domain profile. 12 123 IPR011146 GO:0003824
Mtr5g0414 128 PRINTS Histidine triad family signature 12 28 IPR001310 -
Mtr5g0414 128 PRINTS Histidine triad family signature 33 51 IPR001310 -
Mtr5g0414 128 PRINTS Histidine triad family signature 101 111 IPR001310 -
Mtr5g0414 128 Gene3D - 2 116 IPR036265 -
Mtr5g0414 128 SUPERFAMILY HIT-like 9 115 IPR036265 -
Mtr5g0414 128 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 8 122 - -
Mtr5g0414 128 PANTHER APRATAXIN-RELATED 8 122 - -
Mtr5g0414 128 Pfam Scavenger mRNA decapping enzyme C-term binding 10 116 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0414 K22966 - jre:108985353 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0414 5 3775765 3781348 Mtr5g0414 5 3775765 3781348 ECH