Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0404 ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTACCAGATGCATCCGATTATAAGGGACGGCCGGCCGACAGGTCCACGACCGGTGGTTGGTCGGCAGCCGCAATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTCGGCATCGCCGTTAATTTGGTCACATACTTGACCGGTACTATGCATTTGGGCAATGCTGCCTCTGCCAATGTTGTTACTAACTTCTTAGGAACCTCCTTTATGCTCTGTCTATTGGGTGGATTTCTTGCTGATACTTTTCTAGGAAGATATCTCACCATCGCCATCTTTGCAGCTGTCCAAGCAATTGGTGTAACAATATTGACGATATCAACTATAATTCCAAGCTTACATCCACCAAAATGCAAAGAAGACTCTAAATCTTGCATACAAGCAGACAGCAAGCAACTATTGGTGATGTATTTAGCACTTTATATCACAGCCCTCGGCACTGGCGGTCTAAAATCTAGTGTCTCTGGCTTTGGTTCCGATCAATTTGATGATTCAGATGACCAAGAAAAGAAGGGTATGATTAAATTTTTCAGCTGGTTCTATTTTTTCGTAAGCATAGGGTCTTTGGCAGCAGTGACTGTTCTTGTGTACATACAAGATAACCAAGGTAGAGGTTGGGGTTACGGTATTTGTGCGGTCGCAATTGTGGTTGCGCTCCTTGTTTTCTTGTCCGGTACCCGCAAGTACCGGATCAAGCAACTTGTCGGTAGTCCTTTGACTCAGATTGCGGTCGTGTTTGTGGCTGCTTGGAGGAAGAGACACATGCAATTGCCCTCTGATTCTTCATTGCTCTATGAAGAGGATGATATCCTATGTGAAACACCTAAGACCAAGAAGCAAAGGATGCCACATAGCAAACAGTTCCGTTTCTTAGACAAAGCAGCAATCAAAGGCATAGAAAGTGGCGGTACAATAACCATCAAGGAGAAATGGTATATTTCTACCTTAACAGATGTGGAAGAAGTTAAAATGGTAATAAGGATGTTACCCATATGGGCCACAACCATAATGTTTTGGACAATCCATGCTCAAATGACAACATTCTCAGTATCACAAGCAACAACCATGGATTGTCAAATTGGAACATTTCAAATCCCAGCAGCATCAATGACCGTCTTCTTAATCGGAACTATTCTCCTAACCGTTCCTTTCTACGACCGCTTCATTCGACCCGTCGCAAAAAAAGTACTAAACAACTCACACGGATTCACCCCTTTACAACGCATTGGTGTTGGTTTAGTCCTCTCAGTAATATCCATGGTTGCGGCAGCACTCATAGAAATGAAGCGATTGAAATTCGCAAGATCACATGGTTTTGTAGACGATCCAACGGCAAAGATGCCATTGAGTGTGTTTTGGTTGGTGCCACAATTTTTCTTTGTTGGGTCTGGAGAGGCCTTTATGTATATGGGACAATTAGACTTTTTTCTAAGAGAATGTCCTAAAGGAATGAAAACTATGAGTACAGGGTTGTTCTTGAGCACACTCTCAATAGGGTTTTTCTTTAGCTCATTATTAGTGACTCTAGTGAACAATGTGACCGGTCCAAATAAACCATGGATTGCGGATAATCTTGATCAAGGGAGGCTCTATGATTTTTATTGGCTATTGGCTATGCTAAGTGCTATAAATGTGGTGATATATTTGGCTTGTGCTAAGTGGTATGTGTACAAGGACAAGAGACTTGCTGAGGCAGGCATAGAATTGGAAGAAATAGAGGCCTCTACATTCCATGCATAG 1776 0.4274 MSTLPTTQGKTVPDASDYKGRPADRSTTGGWSAAAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTIAIFAAVQAIGVTILTISTIIPSLHPPKCKEDSKSCIQADSKQLLVMYLALYITALGTGGLKSSVSGFGSDQFDDSDDQEKKGMIKFFSWFYFFVSIGSLAAVTVLVYIQDNQGRGWGYGICAVAIVVALLVFLSGTRKYRIKQLVGSPLTQIAVVFVAAWRKRHMQLPSDSSLLYEEDDILCETPKTKKQRMPHSKQFRFLDKAAIKGIESGGTITIKEKWYISTLTDVEEVKMVIRMLPIWATTIMFWTIHAQMTTFSVSQATTMDCQIGTFQIPAASMTVFLIGTILLTVPFYDRFIRPVAKKVLNNSHGFTPLQRIGVGLVLSVISMVAAALIEMKRLKFARSHGFVDDPTAKMPLSVFWLVPQFFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSIGFFFSSLLVTLVNNVTGPNKPWIADNLDQGRLYDFYWLLAMLSAINVVIYLACAKWYVYKDKRLAEAGIELEEIEASTFHA* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0404 591 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 580 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g0404 591 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Mtr5g0404 591 Pfam POT family 99 533 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr5g0404 591 SUPERFAMILY MFS general substrate transporter 19 571 IPR036259 -
Mtr5g0404 591 Gene3D MFS general substrate transporter like domains 4 577 IPR036259 -
Mtr5g0404 591 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 580 - -
Mtr5g0404 591 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0404 Mtr-Chr5 3672402 3676912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0404 3 583 Organic Solute Cotransporters AT1G12110 63.077 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0404 - - gmx:100813789 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0404 5 3672402 3676912 Mtr5g0404 5 3672402 3676912 ECH
Mtr5g0404 5 3672402 3676912 Mtr4g3612 4 49820683 49825228 PCT