Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0399 ATGAATGAACATGTTCATACTGTAAGCATTCAATTCGATTCCAAGCCAATGAAATTCATCATGTCCACCGCAACACCACTTCTCACACCCCGCCACGTGGCAGTCATCGGAGCCGGCGCCGGAGGCTTAGTAGCAGCACGCGAGCTCCGACGAGAAGGACATCAAGTAGTAGTCTTCGAGCGAGGAGAAGAATTGGGCGGTTCATGGGTCTACACTTCAGAGGTAGAATCCGACCCACTCGGTTTGGACCCGAACCGGAAGCTTATCCACTCGAGCCTATACAATTCACTCCGAACCAATTTGCCTCGGGAGAGTATGGGTTTCCGAGATTACCCTTTTAGGAGGAAAGAAGAGAAGGGGAGAGATTCTAGAAGGTTCCCGAGTCATGGAGAGGTATTGATGTATTTGAAGGATTTTGCTGCGGATTTTGAGATTAGTGATTTGGTGAGGTTGAAGACAGAGGTGGTGTTTGCTGGGGTGGGTGAAGGTGGAAAATGGACGGTGAGATCTAGATCAGTGGAGAGAGAATGTGTGGATGAGATTTATGATGCTGTTGTTGTTTGCAATGGACATTATTTTCAACCAAGACTTCCCAATATTCCTGGCATTAATGCATGGCCAGGGAAGCAAATGCATAGCCATAATTACAGAACACCCGAGCCCTTTCAAGATCAAGTTGTAGTTCTAATTGGTGGTGCTGCCAGTGCGGTTGATATTTCTCGAGACGTGGCAACCGTTGCTAAAGAAGTTCATATTGCAGCTAGGTCTGTTGAAGAAGATAAGCTTGGAAAGTTACCTGGCCATGATAACATGTGGCTTCATTCTATGATTGACAGTGTTCATGAAGATGGTGCAGTGGTTTTTAAAGATGGAAATGCAGTTATCGCTGACTTCATTGTACATTGCACAGGGTACAAGTATGATTTTCCTTTCCTTGAAACCAACAGCGTGGTGACTGTAGATGACAATCGTGTTGGACCACTCTACAAGCATGTTTTTCCACCGGCGTTAGCTCCATGGCTTTCCTTTGTTGGGTTACCTTGGAAGGTTGCTCCCTTCCCTTTGTTTGAATTGCAGAGTAAGTGGATAGCTGGAGTTTTGTCTAATCGCATTGCCCTTCCTTCAGAAGAGGAGATGACTAAAGATATTGAAGCTTTTTACTTGTCACTTGAAGAATCTGGCATTCCTAAGAGGCACACTCATAATATGGGCACGGGCACGGCCGATGTTCAGTGGGACTACAATAACTGGCTTGCAGATCAGTGTGGTGTTCCTGCTATGGAAGAATGGAGAAGGCAAATGTATATGGCTACATCGAAGAACAGGCTCTTGCGACCTGAGACTTATCGTGATGAGTGGGACGATGATGACATTGTTCAACTAGCTGAGCATGAATTTGCTAAGTATCAGATATAA 1416 0.4555 MNEHVHTVSIQFDSKPMKFIMSTATPLLTPRHVAVIGAGAGGLVAARELRREGHQVVVFERGEELGGSWVYTSEVESDPLGLDPNRKLIHSSLYNSLRTNLPRESMGFRDYPFRRKEEKGRDSRRFPSHGEVLMYLKDFAADFEISDLVRLKTEVVFAGVGEGGKWTVRSRSVERECVDEIYDAVVVCNGHYFQPRLPNIPGINAWPGKQMHSHNYRTPEPFQDQVVVLIGGAASAVDISRDVATVAKEVHIAARSVEEDKLGKLPGHDNMWLHSMIDSVHEDGAVVFKDGNAVIADFIVHCTGYKYDFPFLETNSVVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKVAPFPLFELQSKWIAGVLSNRIALPSEEEMTKDIEAFYLSLEESGIPKRHTHNMGTGTADVQWDYNNWLADQCGVPAMEEWRRQMYMATSKNRLLRPETYRDEWDDDDIVQLAEHEFAKYQI* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0399 471 PANTHER DIMETHYLANILINE MONOOXYGENASE 27 469 - -
Mtr5g0399 471 SUPERFAMILY FAD/NAD(P)-binding domain 274 456 IPR036188 -
Mtr5g0399 471 Pfam Flavin-binding monooxygenase-like 274 385 IPR020946 GO:0004499|GO:0050660|GO:0050661
Mtr5g0399 471 Pfam Flavin-binding monooxygenase-like 31 256 IPR020946 GO:0004499|GO:0050660|GO:0050661
Mtr5g0399 471 PRINTS Flavin-containing monooxygenase (FMO) signature 31 47 IPR000960 GO:0050660|GO:0050661
Mtr5g0399 471 PRINTS Flavin-containing monooxygenase (FMO) signature 55 79 IPR000960 GO:0050660|GO:0050661
Mtr5g0399 471 PRINTS Flavin-containing monooxygenase (FMO) signature 211 225 IPR000960 GO:0050660|GO:0050661
Mtr5g0399 471 PRINTS Flavin-containing monooxygenase (FMO) signature 238 253 IPR000960 GO:0050660|GO:0050661
Mtr5g0399 471 PRINTS Flavin-containing monooxygenase (FMO) signature 289 316 IPR000960 GO:0050660|GO:0050661
Mtr5g0399 471 PRINTS Flavin-containing monooxygenase (FMO) signature 354 367 IPR000960 GO:0050660|GO:0050661
Mtr5g0399 471 Gene3D - 33 452 IPR036188 -
Mtr5g0399 471 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 27 469 - -
Mtr5g0399 471 SUPERFAMILY FAD/NAD(P)-binding domain 29 256 IPR036188 -
Mtr5g0399 471 Gene3D - 199 302 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0399 Mtr-Chr5 3608247 3611576 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0399 - - gmx:100793203 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0399 5 3608247 3611576 Mtr5g0399 5 3608247 3611576 ECH