Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0397 ATGGCACTGAATTCATTCACACCACTTTCAATCAATTCTCACCATGTTTCTTGTTACCCTTCAAGTTCCAAGGTTTCAAAGTCCTCTCAAGTTATTTGCAAAATGAGCTTAAACAATGATCATCCTCAAGAGTCCAACAAGAACTGGGGGAAACTTGTTTCGGCCACGTTGGCAGCTGCTGTTATTGTTTTCAGCTCTGACATGTCTGCCCTTGCTGATCTTAACAAATTTGAAGCTGAAGTCAGGGGTGAATTTGGTATTGGATCAGCTGCCCAATTTGGATCAGCAGACCTCAAGAAAACAGTGCACGTGAATGAAAATTTCAGAAGAGCCAATTTCACATCTGCTGATATGAGAGAATCAGATTTTAGCGGTTCTACTTTCAATGGTGCATACATGGAGAAAGCTGTTGCATTCAAAGCAAATTTTACAGGTGCTGATTTGAGTGATACATTGATGGATCGCATGGTTCTTAATGAAGCCAATCTTACGAATGCCATTCTTTCTAGAACAGTCCTCACGCGGAGTGACCTTGGAGGCGCCATCATTGAAGGCGCTGATTTTAGTGATGCCGTGTTGGACCTTCCCCAAAAACTGGCTTTATGCAAGTATGCTAGTGGCACAAATCCTGTAACAGGAGTAAGCACAAGAGTGAGTTTAGGTTGCGGAAACAAACGACGAAATGCTTATGGCACCCCATCATCTCCATTGTTGAGTGCTCCACCACAGAAACTACTAGACCGGGATGGTTTCTGTGATGAAGCATCAGGCCTTTGCGACTCGAAATAG 789 0.4335 MALNSFTPLSINSHHVSCYPSSSKVSKSSQVICKMSLNNDHPQESNKNWGKLVSATLAAAVIVFSSDMSALADLNKFEAEVRGEFGIGSAAQFGSADLKKTVHVNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTGADLSDTLMDRMVLNEANLTNAILSRTVLTRSDLGGAIIEGADFSDAVLDLPQKLALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGTPSSPLLSAPPQKLLDRDGFCDEASGLCDSK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0397 262 Pfam Pentapeptide repeats (8 copies) 91 130 IPR001646 -
Mtr5g0397 262 Pfam Pentapeptide repeats (8 copies) 158 191 IPR001646 -
Mtr5g0397 262 Gene3D - 87 231 - -
Mtr5g0397 262 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 1 261 - -
Mtr5g0397 262 SUPERFAMILY Pentapeptide repeat-like 92 193 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0397 - - gmx:100805220 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0397 5 3600494 3602669 Mtr5g0397 5 3600494 3602669 ECH