Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0385 ATGGGTGGCATAGGTATATTACCCTCAAAACCAGAAAAATATCATTATCAACCTTACAATAATATTAATAACAACAACATTCTTCGCATTAGATCATCAAAATTCACACTATGCTCTTCAATTTTCGTTTTTCTCGCTTTCATTATTTTCTTCTTCATTCTCTCACCTTCCACGTCATCACTTCCCACCAAAAATTCATGGGGCGGACCCGAATGGGAAAAACGGGTCACCAAATCAACCCGCCATAACTCTCCCTCCGGTTCACCACTCACCGTTCTTGTCACCGGCGCTTCTGGTTTCGTCGGTATGCATGTCTCGCTCGCTCTTAAGCGACGTGGCGATGGGGTTTTAGGGATTGATAATTTCAATCGGTATTATGATATTAACCTCAAACGCACTCGTGCCAAGGTTCTTTCACGCGCTGGTGTTTTTGTCGTTGAAGGTGATATCAATGATGTTCATCTTCTCCGTAAACTGTTTGATGTTGTTGCTTTTACGCATGTTATGCATCTTGCTGCTCAAGCTGGGGTTCGTTATGCTATGCGAAACCCTAATTCGTATGTTCACAGCAACATTGCAGGTTTTGTTAACCTCCTTGAAGTTTCTAAATCGGCAAACCCTCAACCGGCGATTGTTTACGCTTCTTCGAGTTCGGTTTACGGGTTAAATTCGAAGACTCCTTTTTCGGAAAAGGATCGAACGGATCAACCTGCTAGTCTCTATGCAGCGACGAAGAAAGCTGGTGAAGAATTTGCACATACTTATAATCATATTTATGGTCTTTCCGTAACTGGTTTACGTTTCTTCACTGTTTATGGTCCTTGGGGTCGTCCTGATATGGCTGTTTACTTATTCACTAAGGATATTTTGAAAGGAAAACAAATTACTGTGTTTGAATCTCCTGATGGTGGAAGTGTAACTAGAGATTTTACGTATATTGGTGATATTGTCAAAGGGTGTTTAGGGGCTTTGGATACAGCTAAGAAAAGTACTGGTAGTGGTGGGAAGAAGAAGGGAAATGCGCAATATAGGATTTTTAACTTGGGTAATACTTCGCCGGTTCCGGTTAGTGAGCTTGTCAATATATTGGAGAAGCTTTTGAAGGTGAATGTGAAGAGGAAGGTAGTGCCGATGCCAATAAATGGTGATGTTAGGTTTACTCATGCTAACATCAGCAGGGCGCAAAGGGAGCTTGGTTACATGCCTACTACTGATTTGGAAGCTGGACTCAAGAAGTTTGTAAGGTGGTACCTTGACTTTCACTCTCCTCTTAAGAACAAGAATGTTTGGTGA 1293 0.4176 MGGIGILPSKPEKYHYQPYNNINNNNILRIRSSKFTLCSSIFVFLAFIIFFFILSPSTSSLPTKNSWGGPEWEKRVTKSTRHNSPSGSPLTVLVTGASGFVGMHVSLALKRRGDGVLGIDNFNRYYDINLKRTRAKVLSRAGVFVVEGDINDVHLLRKLFDVVAFTHVMHLAAQAGVRYAMRNPNSYVHSNIAGFVNLLEVSKSANPQPAIVYASSSSVYGLNSKTPFSEKDRTDQPASLYAATKKAGEEFAHTYNHIYGLSVTGLRFFTVYGPWGRPDMAVYLFTKDILKGKQITVFESPDGGSVTRDFTYIGDIVKGCLGALDTAKKSTGSGGKKKGNAQYRIFNLGNTSPVPVSELVNILEKLLKVNVKRKVVPMPINGDVRFTHANISRAQRELGYMPTTDLEAGLKKFVRWYLDFHSPLKNKNVW* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0385 430 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 88 421 IPR036291 -
Mtr5g0385 430 MobiDBLite consensus disorder prediction 63 87 - -
Mtr5g0385 430 Pfam GDP-mannose 4,6 dehydratase 93 412 IPR016040 -
Mtr5g0385 430 Gene3D - 91 421 - -
Mtr5g0385 430 PRINTS Nucleotide sugar epimerase signature 118 134 - -
Mtr5g0385 430 PRINTS Nucleotide sugar epimerase signature 308 323 - -
Mtr5g0385 430 PRINTS Nucleotide sugar epimerase signature 343 358 - -
Mtr5g0385 430 PRINTS Nucleotide sugar epimerase signature 383 400 - -
Mtr5g0385 430 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 3 428 - -
Mtr5g0385 430 PANTHER EPIMERASE-RELATED 3 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0385 Mtr-Chr5 3536362 3538865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0385 1 422 Miscellaneous Gene Families AT4G00110 69.231 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0385 K08679 - gmx:100803127 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0385 5 3536362 3538865 Mtr5g0385 5 3536362 3538865 ECH