Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0378 ATGAAAGACATGAAACTTGTTTGGTCCCCAGAGAGAGCAACTAACTCATACATAGACACAGTTCAAGCCGTAACCACCAATCACCTTGTCAGTGAATCTGGTGTGGCGGAGTTTGTTTCAGCTATGGCGGCAGGATGGAACGCTCAGCTTATAGTGGAAACATGGTCATGTGGCGGAGTTATTCCAACGAGTGTTGGTTTATCCATAGCAAGCGGTCACAATGGTGGAAGACACGTGTGTATAGTTCCTGATGAACTCTCAAGATCAGAGTATGCAAAAAATATGTTAGAAGCTGGTATGTCACCGGAGGTTTTGGTAGGAGAACCGGAGGAAGTGATGGATGGTTTGATCGGAATAGATTTCTTGGTTGTTGATTCTCGGAGAAAAGATTTTACTAGAGTGTTGAGGTTAGCAAAGTTGAGTGGTAAAGGTTCTGTATTGATATGTAAGAATGCTAATTTTATTTCTAAGATGGATTCTGGTTATATGTGGCGGAGCGTGGTGGCGAGGGGCTCGCGAAGACTTGTTAAGTCGGTGTTTCTTCCGGTGGGGAAGGGGATTCATATGGCACATTTATCAGCTGCCGGTGGTGGTGAGTACTCAGTGGCGGCGGTGAAGCATAAAGCACGTGTTATTCATAATAGATGGATTAAGCATGTTGATCAACGGTCAGGGGATGTTCACTTTATTAGAAAATGA 699 0.4421 MKDMKLVWSPERATNSYIDTVQAVTTNHLVSESGVAEFVSAMAAGWNAQLIVETWSCGGVIPTSVGLSIASGHNGGRHVCIVPDELSRSEYAKNMLEAGMSPEVLVGEPEEVMDGLIGIDFLVVDSRRKDFTRVLRLAKLSGKGSVLICKNANFISKMDSGYMWRSVVARGSRRLVKSVFLPVGKGIHMAHLSAAGGGEYSVAAVKHKARVIHNRWIKHVDQRSGDVHFIRK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0378 232 PANTHER DUF1442 FAMILY PROTEIN 4 232 IPR009902 -
Mtr5g0378 232 Pfam Protein of unknown function (DUF1442) 4 232 IPR009902 -
Mtr5g0378 232 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 4 232 - -
Mtr5g0378 232 Gene3D Vaccinia Virus protein VP39 9 194 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0378 Mtr-Chr5 3479096 3480305 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0378 - - mtr:MTR_5g011820 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0378 5 3479096 3480305 Mtr5g0378 5 3479096 3480305 ECH