Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0365 ATGGAGTGGCCAGCATGTACGGATGAATATGAAAAGCTCTTGATAAGGATGAGCACACCTAGGGTTGTGATTGACAATGCCGTGTGCTCTACTGCTACTCTGGTCAAGGTTATTAGTGCAAGAAGGAATGGTAGTCTACTTAATGCAATACAAGTACTCATTGATCTTAATCTTTTAATTAAGAAGGCTTATATATCTTCTGATGGCAAATGGTTCATGGATGTATTTCATGTAACTCATCAAAACGGAAGCAAGATAATCGACGAGAACATTTTAAAATATATAGAACAGTCGCTTGGGAGCACTCATAATGTGAGAACTAATTGCTCAAACGGTCTCACTGTGCTTGAATTATCAGGAACCGATAGAGTTGGTCTTCTGTCGGAGGTGTTTGCCGTACTTGCTGATCTTCAATGTGATGTTGTTGAAGCAAAGGTGTGGACTCACAATGGTCGCATTGCCTCTTTGATCTATGTTAAAGACTGCGATTCTGGATCCACTATTGAGGATTCTCAGAAAATTAAAAAGATTGAAGTGCGTTTAAGAAACGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAAACTTCTGTTTCTATGTCTGTCATGCATAGTGAAAGAAGGCTGCATCAAATGATGTTCGCTGATCGTGACTACGAGAGGACTCCCATTCTAAAGCTTACTTCCGATAACACTTTAGTGACAGTCCAGAATTGGGCAGAAAGGGGTTATTCAGTTGTTAATATTCAATGCAAGGATCGAATCAAACTATTATTTGACGTGGTATGCAATTTGACAGATATGGAGTACGTCGTGTTTCATGCGACCATCAACACAAATAGTAACCAAGCTTACTTGGAGTTTTATATAAGACACAAGGATGGCACCCCAATTAGTTCAGAACCAGAGCGACAACGCGTAATTCAATGTTTAAAAGCTTCTGTGGAGAGAAGGGCATCTGAGGGTGTTCAACTAAAGTTATGCACAGAAGACAAGCAAGGACTTCTAGCAGAAGTGATGCGAACCTTCCGAGAGAATGGACTTAATGTTACAAGAGCTGAGATATCCACCTTAGAAAACATGGCTACAAATGTTTTCTATGTAACAGACGTGACTGGAAAACCAGCTGATCCAACAACTATAGAGTCTGTTAGGCAGAAGATTGGTTCAAGCAATTTAGAAGTGAAGGAGTTACCATTGATTTATCATCAGAAGACAGAGAGAGAGGATCAAACAGTTGGAATTGGTGGTGCAGTGTTATGGTTTATTGGGAGCCTTGTGAGAAGGAATCTGTATAGTTTGGGATTAATTAAATCATGTTCTTAA 1326 0.3959 MEWPACTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLIKKAYISSDGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVLELSGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEVRLRNVLKGDNDIRSAKTSVSMSVMHSERRLHQMMFADRDYERTPILKLTSDNTLVTVQNWAERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKDGTPISSEPERQRVIQCLKASVERRASEGVQLKLCTEDKQGLLAEVMRTFRENGLNVTRAEISTLENMATNVFYVTDVTGKPADPTTIESVRQKIGSSNLEVKELPLIYHQKTEREDQTVGIGGAVLWFIGSLVRRNLYSLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0365 441 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
Mtr5g0365 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Mtr5g0365 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Mtr5g0365 441 CDD ACT_ACR_3 244 318 - -
Mtr5g0365 441 Gene3D - 322 393 - -
Mtr5g0365 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Mtr5g0365 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Mtr5g0365 441 SUPERFAMILY ACT-like 320 388 IPR045865 -
Mtr5g0365 441 Gene3D - 113 188 - -
Mtr5g0365 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Mtr5g0365 441 Pfam ACT domain 114 169 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0365 Mtr-Chr5 3381325 3384384 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0365 - - lja:Lj2g3v2002690.1 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0365 5 3381325 3384384 Mtr5g0365 5 3381325 3384384 ECH