Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0364 ATGGCTACTACACACTACGATTTACCTTCAACCTTGTCACTGCGTTCGAACCCTTCTCTTCGTTTGATTCAGAATTTGAACATAACAAACCCTAACAATTCATGGTTAGGAACCAAAATTAGGGTTCAACATTGCTCTGTCAGTGTAAAATCCTCCGTCTCCGTTTTCCACCGCCGTCCTTTGGCTGCTACCGTTTCCTTCAGTCTCCCCACCTCAAATCCTGAGCGTGTTTCTCCAGGCCAGGAAATTCCCAAATGGTCTTCTAAAGCTATAAAATCGTTTGCAATGTCTGCAATCGAGGCAAGAAAACTCAAGTTTACTACTACTGGCACTGAAGCTCTTATCATGGGGATTCTTATCGAGGGTACTAATCTGGCTAGCAAGTTTTTGAGAGCCAATGGAATTACACTTTTCAAGGTGCGAGATGAAATTGTGAAAATACTTGGAGAAGTTGATCCGTTTACAGAAACCCCCGAGCGTCCACCAATGACTGATGATGCTCAGAGGGCCCTTGATTGGGCTGTTGATCGAAAATTAAAATCTGTTGATGGTGGGGAAGTAACCACAGCACACATAATTCTTGGCATTTGGTCTGATGTGGATTCCCCAGGTCACAAGATACTATCCAAACTTGGCATTAATGACGAAAAAGCTAAAGAGCTAGAGGCCTCAATTTCTAAACATGTTGTTAAGGATGAGTGA 702 0.4302 MATTHYDLPSTLSLRSNPSLRLIQNLNITNPNNSWLGTKIRVQHCSVSVKSSVSVFHRRPLAATVSFSLPTSNPERVSPGQEIPKWSSKAIKSFAMSAIEARKLKFTTTGTEALIMGILIEGTNLASKFLRANGITLFKVRDEIVKILGEVDPFTETPERPPMTDDAQRALDWAVDRKLKSVDGGEVTTAHIILGIWSDVDSPGHKILSKLGINDEKAKELEASISKHVVKDE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0364 233 ProSiteProfiles Clp repeat (R) domain profile. 83 228 IPR004176 -
Mtr5g0364 233 Gene3D - 85 233 IPR036628 -
Mtr5g0364 233 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT2, CHLOROPLASTIC 12 233 - -
Mtr5g0364 233 SUPERFAMILY Double Clp-N motif 85 218 IPR036628 -
Mtr5g0364 233 Pfam Clp amino terminal domain, pathogenicity island component 100 149 IPR004176 -
Mtr5g0364 233 Pfam Clp amino terminal domain, pathogenicity island component 186 225 IPR004176 -
Mtr5g0364 233 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 12 233 IPR044217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0364 Mtr-Chr5 3372277 3375649 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0364 - - cam:101488253 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0364 5 3372277 3375649 Mtr5g0364 5 3372277 3375649 ECH