Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0363 ATGTCATCAACATGCAAATTAGGAGAAAACCTCTGCTCAAACCATAAAACTAACCAACCACCTTCACCTCCTCCACCATTACAAACCCGAAAATGCGACATAAATCCGGGGAAGTCGTTGCTTTCAGAGGAGCTAAGAGTTCAAGGAAGATTAGCTTTTCCAATGGTGTTGATGAATTTAGCTTGGTTTGCCAAGACAGCTATCACAACAGCATTCTTGGGTAGACTAGGTGAGCTCAGGTTAGCCGGTGGCGCACTCGGGTTCACTTTCGCTAACGTTACCGGCTTCTCTGTCTTGAATGGTCTCTGTGGTGCCATGGAACCTATTTGTGGACAGGCTCATGGAGCTAAAAACGTAAGACTCCTTCACAAGACACTTCTCATGACAATTTTATTGTTGCTATTGGTAACAATTCCTATTACTTTCATGTGGCTTCATATTGACAAAATTTTGATTCATTTTGGCCAACAACAAGAAATTTCTACTGTTGCTGGTACTTATGTTTACTATCTCATACCTGATTTGTTTGTTATGTCACTCTTGTGTCCCTTAAAAGCTTACTTGAGCTCTCAAAGCATCACTCTTCCTACCATGTTTAGTTCTGGTGTAGCACTTGCTTTTCATGTTCCTGTTAACATACTACTCTCAAAAACCATGGGTCTAAGAGGGGTTTCCATGGCTGTTTGGATAACTGATCTTATTGTTGTTGTTCTTCTGGTCATTTATGTTGTAATTCTAGAGAATCGAAAGGTATTAGCGTGGAAAGAAGGAGGATGGTGGGATCAGAGTATTATGGATTGGATTAGGCTAATCAAGCTATCTGGATCTTGTTGTCTCAACACATGTATGGAGTGGTGGTGCTATGAAATTCTAGTCTTGCTTACTGGCCACCTCGCAAATGCCCGACAAGCATTAGGAGTTTTAGCCATTGTGTTGAACTTCGACTATTTGCTTTTCTCGGTGATGTTGTCGTTGGCAACTTGTGTTTCCACCCGTGTCTCGAACGAGCTTGGCGCAAACCAAGCCGACCGTGCATACAGGTCAGCGCGTGTGTCTCTAGGATTAGGTTTTATCACAGGGTGCACCGGCAGCTTGGTGATGGTGGCTGCAAGGGGAATTTGGGGGCAACTCTTCAGCCATGATAGGGGTACTATAAATGGAGTAAAAAAGACAATGTTGTTGATGGCTCTAGTGGAATTGTTTAATTTTCCATTGGCAGTTTGTGGAGGTATAGTTCGAGGGACAGCTCGACCTTGGTTGGGTATGTATGCAAATCTAGGCGGGTTTTATTTTCTGGCTCTGCCCCTTGGTGTTGTTTTTGCCTTCAAGCTTCGTCTTGGCCTTGTTGGACTCTTCTTTGGACTTCTTACTGGTATTGTTGTTTGCTTGTCATTATTATTAGTATTCATTGCTAGGATAAAGTGGGTGGAAGAAGCTGCCAAGGCACAAATACTAGCAAGTAACGACCAAGTTAAAGAAGTTCCCTGTGATGACGCAGAAGTACCAACTGAGGCTCGTGAAAATGACAAAGTGTAA 1536 0.4297 MSSTCKLGENLCSNHKTNQPPSPPPPLQTRKCDINPGKSLLSEELRVQGRLAFPMVLMNLAWFAKTAITTAFLGRLGELRLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNVRLLHKTLLMTILLLLLVTIPITFMWLHIDKILIHFGQQQEISTVAGTYVYYLIPDLFVMSLLCPLKAYLSSQSITLPTMFSSGVALAFHVPVNILLSKTMGLRGVSMAVWITDLIVVVLLVIYVVILENRKVLAWKEGGWWDQSIMDWIRLIKLSGSCCLNTCMEWWCYEILVLLTGHLANARQALGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQADRAYRSARVSLGLGFITGCTGSLVMVAARGIWGQLFSHDRGTINGVKKTMLLMALVELFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVVCLSLLLVFIARIKWVEEAAKAQILASNDQVKEVPCDDAEVPTEARENDKV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0363 511 PANTHER PROTEIN DETOXIFICATION 56 34 491 - -
Mtr5g0363 511 Pfam MatE 277 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr5g0363 511 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr5g0363 511 MobiDBLite consensus disorder prediction 1 27 - -
Mtr5g0363 511 PANTHER MULTIDRUG RESISTANCE PROTEIN 34 491 - -
Mtr5g0363 511 MobiDBLite consensus disorder prediction 1 17 - -
Mtr5g0363 511 TIGRFAM matE: MATE efflux family protein 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr5g0363 511 CDD MATE_eukaryotic 44 481 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0363 Mtr-Chr5 3370104 3372207 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0363 K03327 - gmx:100804083 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0363 5 3370104 3372207 Mtr5g0363 5 3370104 3372207 ECH