Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0360 ATGTCAACCTTCTCTCAAGGTGGTGCAAGTAGTAACAGAAACGGTAACACTAACAGTAACACCAGAACTTCTTTCAAACCACCATCGTCAAATGTCAAGTCCAAACCAACTCAACGCCGCAACACCACCACCGGCGCCGCCAAGGACCGTCATGCTTCTGTTCCTGGAAGAGTTAGAGTAGCTGTTAGGCTGCGGCCACGTAATGCGGAGGAATCAGTAGCGGATGCTGATTTTGCTGACTGTGTTGAATTACAGCCTGAGCTGAAAAGGTTGAAACTTAGGAAGAACAATTGGGATGGAGAGACTTATGAATTTGATGAGGTGCTTACTGAATTCGCGTCGCAAAAACGTGTTTATGAAGTTGTGGCTAGGCCTGTTGTGGAGAGTGTATTGGATGGCTACAATGGGACAATTATGGCCTATGGGCAGACTGGTACTGGTAAAACGTATACTCTTGGAAGACTTGGGGAGGAAGACACAGCTGCGCGTGGAATAATGGTGCGAGCCATGGAAGATATTTTTGCAGATGTTTCCTTGGAAACTGATTCAGTCTCAGTCTCATATTTGCAGCTTTATATGGAGACTATACAGGATCTTCTTGATCCTGCCAATGATAACATAGCCATTGTAGAAGATCCCAAAACTGGTGATGTTTCATTACCTGGAGCTACTCTAGTCGAGATTAGGGACCAACAGAGTTTTGTTGAACTACTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACGAAACTGAATACCGAATCTTCTAGAAGTCATGCTATTCTAATGGTGCATGTAAAACGATCCATCAAAGGAAGAGATGCTTCTCATTCAAGTGAAAATGGAAATCATCCACACATGGTCAAATCGTTAAAGGCGCCTATTGTTCGGAAAGCCAAGTTGGTTGTTGTAGATCTTGCTGGCTCAGAACGAATTGACAAATCAGGAAGTGAAGGACATATGTTAGAAGAAGCCAAATCCATCAATCTTTCTTTGAGTGCACTGGGGAAATGTATTAATTCACTTGCAGAGAATAGTGCGCATGTGCCATTTCGTGACTCAAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTTGTCATTACTATTGGGCCATCACCACGGCATAGGGGCGAGACTGCCAGTACTATAATGTTTGGACAGAGGGCTATGAAGGTGGAAAACATGATAAAACTGAAGGAGGAATTTGATTACAAAAGCTTATCAAGAAGGCTAGACATAGAATTAGATAAACTCATAATGGAACATGAAAGACAGCAGAAGGCATTTGAGGATGAGATTGAAAGGTTAGCTACTGAAGCACAGCATCAGATATCTGAGGCTGAAAGAAACTATGTAGATTCATTGGAGAAGGAAAGATCAAAGTATCAGAAAGAATATATGGAGTCAGTTAAGAAGCTTGAAGAGAAGTTTTTGATGAATCAACGAAAGAATGAGGAGCCTAATATGAAATCAAGCATGGAGATTCCCAAGGTATCTGCTGAGGAAATGGCTGATTTGAAGAAAATGCTTCAAAAAGAGACTCTTTTAAGAAAAGCTGCTGAAGGGGAAACAAATAATTTGAAGATTCATGTCGCTGAACTAAAACAGTCAGAGACATCAGCAAAGTCAGAGATATCAAAACTTCATAAGATGTTGGAAGATGAGGCTCATCAGAAAGAGAAACTTGAAGGCGAAATAGCAATATTACAAAGTCAATTGTTGCATTTAAGTCTTGAAGCTGATGAGACAAGTCGACAACTAGACGAGGGCAGATTTGAAAAAGAAGTGGGTGGTCGGGATTCTCTCACTTCCCAAGTTAAGCATCAGCTGCAAGCTTCAGGAAATGGGGAGAAGCCTTCAATAGGCAAGCTCTTTGAGCAAGTGGGATTGCAGAAGATTTTGTCATTGCTTGAAGCAGAAGATGCTGATGTGCGAATCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCGGAAGAAACAAATCAGGGGAGGATTGTAGAAGCGGGGGGGCTTACATCGTTGCTTACGCTGCTTAAGACCACACAAGATGAGACCATACTTAGAGTTGCAGCAGGTGCTATTGCAAATTTGGCAATGAATGAAACCAACCAAGAACTCATTATGGCCCAAGGGGGCATTAGTTTGCTGTCGATGACTGCAGCCAATGCTGAAGATCCACAAACTCTTCGCATGGTTGCTGGGGCCATTGCTAATCTCTGTGGAAATGATAAGCTACAAACAGAATTAAGGGGTGAAGGTGGTATCAAGGCACTGCTGGGAATGGTGAGATGCAGACATCCTGATGTGCATGCGCAGGTTGCTCGAGGAATAGCAAATTATGCGAAGTGTGAGTCAAGAGCATCTAGTCAAGGGTTAAAGAGTGGAAGATCTTTCCTTATCGAGGATGGGGCTCTTCCATGGATTGTTCAAAATGCAAATAATGAAGCATCGTCAATTAGGCGCCATATTGAGCTTGCCCTCTGTCATTTAGCACAACACGAAGCAAATGCAAGAGATATGATTAAAGGGGGTGCATTATGGGAGCTAGTTCGTATCTCACGAGATTGTTCCAGAGAAGACATAAAGACTCTTGCACATCGAACGCTAGCCTCCATCCCCGCTTTCCAAGCCGAAATGAGGCGTATGCGGGTGAGTCGTTGA 2685 0.4305 MSTFSQGGASSNRNGNTNSNTRTSFKPPSSNVKSKPTQRRNTTTGAAKDRHASVPGRVRVAVRLRPRNAEESVADADFADCVELQPELKRLKLRKNNWDGETYEFDEVLTEFASQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDIFADVSLETDSVSVSYLQLYMETIQDLLDPANDNIAIVEDPKTGDVSLPGATLVEIRDQQSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSIKGRDASHSSENGNHPHMVKSLKAPIVRKAKLVVVDLAGSERIDKSGSEGHMLEEAKSINLSLSALGKCINSLAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMIKLKEEFDYKSLSRRLDIELDKLIMEHERQQKAFEDEIERLATEAQHQISEAERNYVDSLEKERSKYQKEYMESVKKLEEKFLMNQRKNEEPNMKSSMEIPKVSAEEMADLKKMLQKETLLRKAAEGETNNLKIHVAELKQSETSAKSEISKLHKMLEDEAHQKEKLEGEIAILQSQLLHLSLEADETSRQLDEGRFEKEVGGRDSLTSQVKHQLQASGNGEKPSIGKLFEQVGLQKILSLLEAEDADVRIHAVKVVANLAAEETNQGRIVEAGGLTSLLTLLKTTQDETILRVAAGAIANLAMNETNQELIMAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQTELRGEGGIKALLGMVRCRHPDVHAQVARGIANYAKCESRASSQGLKSGRSFLIEDGALPWIVQNANNEASSIRRHIELALCHLAQHEANARDMIKGGALWELVRISRDCSREDIKTLAHRTLASIPAFQAEMRRMRVSR* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0360 894 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 636 678 IPR000225 GO:0005515
Mtr5g0360 894 MobiDBLite consensus disorder prediction 1 43 - -
Mtr5g0360 894 Pfam Kinesin motor domain 63 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0360 894 SUPERFAMILY ARM repeat 624 882 IPR016024 -
Mtr5g0360 894 SMART arm_5 708 749 IPR000225 GO:0005515
Mtr5g0360 894 SMART arm_5 666 707 IPR000225 GO:0005515
Mtr5g0360 894 SMART arm_5 750 790 IPR000225 GO:0005515
Mtr5g0360 894 SMART arm_5 625 665 IPR000225 GO:0005515
Mtr5g0360 894 PANTHER KINESIN-LIKE PROTEIN KIN-UA 41 886 IPR033291 GO:0008017|GO:0032886|GO:0048364
Mtr5g0360 894 Coils Coil 427 480 - -
Mtr5g0360 894 MobiDBLite consensus disorder prediction 1 56 - -
Mtr5g0360 894 CDD KISc 57 398 - -
Mtr5g0360 894 ProSitePatterns Kinesin motor domain signature. 300 311 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr5g0360 894 Gene3D Kinesin motor domain 48 430 IPR036961 -
Mtr5g0360 894 SMART kinesin_4 55 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0360 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 435 IPR027417 -
Mtr5g0360 894 PRINTS Kinesin heavy chain signature 133 154 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0360 894 PRINTS Kinesin heavy chain signature 301 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0360 894 PRINTS Kinesin heavy chain signature 350 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g0360 894 PANTHER KINESIN-RELATED 41 886 IPR027640 GO:0003777|GO:0007018
Mtr5g0360 894 Coils Coil 553 587 - -
Mtr5g0360 894 Pfam Armadillo/beta-catenin-like repeat 673 706 IPR000225 GO:0005515
Mtr5g0360 894 Coils Coil 511 531 - -
Mtr5g0360 894 Gene3D - 728 891 IPR011989 -
Mtr5g0360 894 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 677 720 IPR000225 GO:0005515
Mtr5g0360 894 Gene3D - 545 727 IPR011989 -
Mtr5g0360 894 ProSiteProfiles Kinesin motor domain profile. 57 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0360 Mtr-Chr5 3331715 3340357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0360 58 426 Miscellaneous Gene Families AT2G21380 34.190 1.16e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0360 - K10396 gmx:100804612 1504.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0360 5 3331715 3340357 Mtr5g0360 5 3331715 3340357 ECH