Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0358 ATGCAGTTCCTCACTCTGGTCAGGTGGAATATAAACTCTGCTACAAAACAAAACATGTATTCAATTTCATGCAGAGTGAATCAGTTGCATAACGTTAGTTGCTCGCATCTTTCACTCTTTCATGTTCGAAGACCTCCAATCTATGTACCATGCTCGACCAACCTTTCTTCTATATTCTCAATTCCTTCGGGTTCACACTTCCTAAGAAAGTACAGGAGCTCCAAGTTTCTTCTCAAATGCGCGTCGCTAAACTCTTCAGGTTCCCTGACACCTGATCCAATCCCACAGATAATGAATCAAAAACCAATGTCTATTTTGGAGATTCTAAAGCAAGCAAATTCAATTCTACCTTATGTAGTCCTTGCTAGCACACTGGTAGCACTAGTCTTCCCACCTTCTTTTACGTGGTTTACCAGCAGATACTATGCTCCTGCACTAGGATATTTGATGTTTGCAGTTGGAGTTAATTCAAGTGAAAAGGACTTCCTTGAGGCATTTAACAGGCCAGCAGAACTTGTCACTGCTTATGTTGGTCAGTTTGTGGTGAAGCCTCTTCTTGGATATCTTCTTTGCATAATATCAGTAAATTTATTTGGTCTACCATCAGCGATAGGCGCAGGAATTGTATTGCTGGCTTGTGTTAGTGGAGCACAACTCTCAAGTTACGCTACTTTTCTATCAGATCCACAAATGGCACCATTAAGCATAGTTATGACATCGTTATCCACTATTTCTGCGGTTTTTGTCACGCCACTCTTATTATTGTTTTTTATCGGGAAGAGACTTCCTATTGATGTAAAAGGAATGGTGTTTAGTATTACTCAAATTGTGCTTGTTCCTATTACATTTGGTCTACTTTTAAATCGATTCTACCCTAATATTTGTAATGCTATTCGGCCGTTTTTGCCTCCACTATCAGTATTGGTTGCAGCTCTCTCTGCAGGAGCACCACTCGCTCTTAACATCAAATCCGTTAAATCCCCCTTTGGGTTTTCTATCCTTTTGCTTGCTGTTGCTTTTCATTTGTCATCTTTCGTTTCTGGTTATATTCTTAGTGGATTCATCTTCCGTGACTCACCTGATGTGAAGCCACTGCAGAGAACAATTTCCTTTGAGACAGGAATGCAAAGTAGTCTCCTTGCCTTGGCTCTAGCAAATAAATTCTTTGAAGATCCCGTTGTCGGTATGCCTTCTGCAATTTCTTCTCCGCTTATGTCTTTGATGGGATTTTCTCTTGTTCTGATTTGGATTATTGCTATGGCTTTGGTGTGGCAATATGGAGAGAAATCTGGGTATGAAGCTTGGAAGGGTCTTTCTTGGGGGATGGTACCTCTACTTGGTGGAGCATTTTGTGCATGCACATGGCATTTCTTTTATAACTCTGACTCCCTTGAGGTATTGGTAGCTCTTCAAGCGGCACTAACTGTTATAGGTAATTTCACAATGTGTATAGCTGCATACCGGATATACAAATCATCCCGCGAAAGCTCTGAGAACATTTGA 1503 0.4079 MQFLTLVRWNINSATKQNMYSISCRVNQLHNVSCSHLSLFHVRRPPIYVPCSTNLSSIFSIPSGSHFLRKYRSSKFLLKCASLNSSGSLTPDPIPQIMNQKPMSILEILKQANSILPYVVLASTLVALVFPPSFTWFTSRYYAPALGYLMFAVGVNSSEKDFLEAFNRPAELVTAYVGQFVVKPLLGYLLCIISVNLFGLPSAIGAGIVLLACVSGAQLSSYATFLSDPQMAPLSIVMTSLSTISAVFVTPLLLLFFIGKRLPIDVKGMVFSITQIVLVPITFGLLLNRFYPNICNAIRPFLPPLSVLVAALSAGAPLALNIKSVKSPFGFSILLLAVAFHLSSFVSGYILSGFIFRDSPDVKPLQRTISFETGMQSSLLALALANKFFEDPVVGMPSAISSPLMSLMGFSLVLIWIIAMALVWQYGEKSGYEAWKGLSWGMVPLLGGAFCACTWHFFYNSDSLEVLVALQAALTVIGNFTMCIAAYRIYKSSRESSENI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0358 500 Pfam Sodium Bile acid symporter family 144 326 IPR002657 GO:0016020
Mtr5g0358 500 PANTHER SODIUM-BILE ACID COTRANSPORTER 59 416 IPR004710 -
Mtr5g0358 500 Gene3D - 102 417 IPR038770 -
Mtr5g0358 500 Pfam Protein of unknown function (DUF2499) 411 487 IPR019634 -
Mtr5g0358 500 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS6, CHLOROPLASTIC-RELATED 59 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0358 Mtr-Chr5 3301484 3305300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0358 19 416 Organic Solute Cotransporters AT4G22840 57.805 5.98e-154 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0358 - - mtr:MTR_5g011450 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0358 5 3301484 3305300 Mtr5g0358 5 3301484 3305300 ECH