Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0354 ATGAAAATAATAGTGCCTTTGCAAGGAGTTGTTCAAGGAACAGGGGGTCTTTTTTGGGGTTCAGTTATTCCTTGCGCTCTTTTCTACTTTCTTCAGCTTTATTTTAAGACACGTAACCGCCAATCTCCTCCTTCTAACAACCTTCCGCCTCCGGAGCTTCCCGCCTTGTCACGCACTCTCTCACCTCGGATCAGAGGTTCAACCGCCTCCGCTAATATTTCGGGTCGGGTCAATTCCATAATCACAACAAACTCTCCTTATTACGTAGGTTTAAACAAAGTCGCAGATAATCCTTATCATCGGATTCATAATCCTGATGGTGTTATTCAGCTTGGTTTAGCCCAAAACACCCTATGTGTGGATTTGATTGAAGAATGGATTCGTCACAATGGAAGCGCTGCTATATTAGGGACACCATCAAATTGTGGTTGCCTCAGTATCACTGACCTTGCTACTTACCATGGATTCATGGACTTCAAAGTGGTTGTGGCTGGTTTCATGTCTCAAGTTTTGGAAAAACCAGTTTTTTTCAACCCATCACATATGGTGCTAACTGCAGGTGCTATCCCTGCCATTGAAATTCTAAGCTTCTGCCTAGCAGATAATGGAAATGCATTCCTTGTTCCCACGCCTCATAGTCCTGGCTTTGATGAGGCTGTAAAATGGCGATCTGGGGTGGATATAGTATATGTTTCATGTCGCAGCGCTGATGACTTCAACATAAGCATAACTGCACTTGACCAAGCTTTCAACCAAGCGAAGAAACGCAGTCAAAAAGTTCGTGGAGTTATAATATCAAACCCTTCGAACCCTGCTGGAAAATTATTAAATCGAGAAACACTGCTTGATCTTCTGGACTTCGCCAGAGAGAAGAACATTCATATAATCTCTAATGAAATATTTGGAGGCTCTGCTTATAGAAACGAAGAGTTTGTGAGCATGGCAGAAATCATGGAAGCGGAAGATCATGATCGGGGCAGAGTTCATATAGTGTTTGATTTGGCAAATGAGCTATATGTTCCAAGTTTTAATGTAGGAGTTATATACTCCCACAATGAGAATGTTGTGGATGCCTCCAAAAAAATGGCACAATTCTCAACTGTTTCTGCTCCAACTCAGCAATTGCTTATTACCATGATTTCAGATACAAGGTTTATTCAAGAACTCATAAAGACTAACAAGTTGAGGCTGCAAAAAATGTATAATGCATTAGTGGAAGGATTAGAGCATTTGGGAATTGAGTGCACTAGAAGCAGTGGCGGCTTCTGCTGCTGGGCTGACATGAGTAGATTCATCCGTTCTTACAGTGAAAAGGGGGAACTGGAGCTCTGGGACAGATTGCTGAATGTAGCTAAGATCAATGTTACTCCGGGATCCTCTTGTCACTGTATTGAACCTGGATGGTTCCGTTTCTGTTTTACTACATTATCTGAAAATGATATTCCTGTAGTAGTGGAACGGATCGGGAGAATTTTCAAGACTACAAGTTGA 1491 0.4199 MKIIVPLQGVVQGTGGLFWGSVIPCALFYFLQLYFKTRNRQSPPSNNLPPPELPALSRTLSPRIRGSTASANISGRVNSIITTNSPYYVGLNKVADNPYHRIHNPDGVIQLGLAQNTLCVDLIEEWIRHNGSAAILGTPSNCGCLSITDLATYHGFMDFKVVVAGFMSQVLEKPVFFNPSHMVLTAGAIPAIEILSFCLADNGNAFLVPTPHSPGFDEAVKWRSGVDIVYVSCRSADDFNISITALDQAFNQAKKRSQKVRGVIISNPSNPAGKLLNRETLLDLLDFAREKNIHIISNEIFGGSAYRNEEFVSMAEIMEAEDHDRGRVHIVFDLANELYVPSFNVGVIYSHNENVVDASKKMAQFSTVSAPTQQLLITMISDTRFIQELIKTNKLRLQKMYNALVEGLEHLGIECTRSSGGFCCWADMSRFIRSYSEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLSENDIPVVVERIGRIFKTTS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0354 496 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 494 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 111 137 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 144 160 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 181 201 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 203 224 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 257 281 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 293 316 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 327 351 - -
Mtr5g0354 496 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 359 382 - -
Mtr5g0354 496 Pfam Aminotransferase class I and II 110 488 IPR004839 GO:0009058|GO:0030170
Mtr5g0354 496 Gene3D Aspartate Aminotransferase, domain 1 97 487 IPR015422 GO:0003824
Mtr5g0354 496 Gene3D - 131 382 IPR015421 GO:0003824
Mtr5g0354 496 PANTHER AMINOTRANSFERASE ACS10-RELATED 2 494 - -
Mtr5g0354 496 CDD AAT_like 155 490 - -
Mtr5g0354 496 SUPERFAMILY PLP-dependent transferases 86 493 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0354 Mtr-Chr5 3279739 3282937 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0354 K14270 - gmx:100783490 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0354 5 3279739 3282937 Mtr5g0354 5 3279739 3282937 ECH