Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0344 ATGGGAACGGTGGCTCAAAGAGTTGAAAGCTTAGCCTTGAGTGGTATATCATCAATCCCAAAAGAATATGTGAGACCAAAAGAAGAGTTAGCAAACATAGGTAACATCTTTGATGAAGAAAAAAAAGAAGGTCCTCAAGTTCCAACAATAGACCTAAAAGAAATAAACTCTTCAGATGAAATAGTTAGAGGAAAATGTAGAGAGAAGCTTAAGAAAGCTGCAGAAGAATGGGGTGTGATGCATTTAGTGAACCATGGTATATCTGATGATCTTATTAATCGTTTGAAGAAAGCTGGTGAAACATTTTTTGAGCTTCCTGTTGAAGAAAAAGAGAAATATGCAAATGATCAAAGTTCTGGGAAGATTCAAGGTTATGGAAGTAAATTAGCTAATAATGCTAGTGGTCAACTTGAATGGGAAGATTATTTCTTTCATTGCATTTTTCCAGAGGATAAACGTGATTTGTCTATATGGCCCAAGACACCTGCTGATTATACTAAGGTTACAAGCGAATATGCAAAGGAATTAAGAGTCCTAGCTAGCAAGATAATGGAAGTGTTATCTCTTGAACTAGGGTTGGAAGGTGGAAGGTTAGAAAAAGAAGCTGGTGGAATGGAAGAGCTTTTACTTCAAATGAAAATTAATTACTACCCAATTTGCCCTCAACCAGAGCTAGCACTTGGAGTTGAAGCCCATACAGATGTAAGTTCACTTACTTTCCTCCTCCATAATATGGTGCCAGGTTTGCAACTTTTCTATGAGGGCAAATGGGTCACTGCAAAATGTGTACCTGATTCAATTCTCATGCATATTGGTGACACAATTGAGATACTTAGCAATGGAAAGTACAAAAGTATCCTTCATCGTGGATTGGTGAATAAGGAAAAAGTTAGAATATCTTGGGCAGTGTTTTGTGAACCACCTAAGGAGAAAATTATTCTGAAGCCACTTCCTGAACTTGTAACTGAAAAAGAACCAGCAAGGTTTCCACCTCGCACTTTTGCTCAGCATATTCATCACAAACTTTTTAGGAAGGATGAGGAGGAGAAGAAAGATGATCCCAAAAAATGA 1071 0.3744 MGTVAQRVESLALSGISSIPKEYVRPKEELANIGNIFDEEKKEGPQVPTIDLKEINSSDEIVRGKCREKLKKAAEEWGVMHLVNHGISDDLINRLKKAGETFFELPVEEKEKYANDQSSGKIQGYGSKLANNASGQLEWEDYFFHCIFPEDKRDLSIWPKTPADYTKVTSEYAKELRVLASKIMEVLSLELGLEGGRLEKEAGGMEELLLQMKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYEGKWVTAKCVPDSILMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVTEKEPARFPPRTFAQHIHHKLFRKDEEEKKDDPKK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0344 356 Pfam 2OG-Fe(II) oxygenase superfamily 211 307 IPR044861 -
Mtr5g0344 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 350 - -
Mtr5g0344 356 SUPERFAMILY Clavaminate synthase-like 6 344 - -
Mtr5g0344 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 350 - -
Mtr5g0344 356 Gene3D - 3 350 IPR027443 -
Mtr5g0344 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 307 IPR005123 -
Mtr5g0344 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 160 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0344 Mtr-Chr5 3212562 3215158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0344 8 337 Glycosyltransferase AT5G59530 29.940 7.72e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0344 K05277 - gmx:547615 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0344 5 3212562 3215158 Mtr5g0344 5 3212562 3215158 ECH