Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0331 ATGAGTGTTTTGCTATGGAGGTTAATTCTTCTTTTTCTTGTTGGGATTGTCTTCTCTCCTAAACATTGTGTATCTATAAAAGATACAGGTAGAAAATACAGTTTTATGCAAGATGCAACTTCAGCACCAATCATATCCTTCTATGATTACATCATAATTGGTGGTGGCACTGCAGGGTGTCCTTTGGCTGCAACACTGTCCAAAAATCATAGGGTTTTGGTGCTTGAACGTGGTGGATCACCTTATGGGAATCCAAACATAACCAATTTAAGTGCCTTTGGTGTTGCACTTTCTGATCCATCTCCTTCCTCTCCTGCTCAACGATTCATTTCTGAAGATGGTGTTATTAATTCAAGAGCTCGTGTTCTAGGTGGTGGAAGTTGTTTGAATGCCGGCTTCTATACTCGTGCAAGCCCTCGCTACGTAAGTGAAGCTGAATGGGATGAAAAGTTAGTGGATGAATCATATAAATGGGTGGAGAGAGTGGTGGCTTTTCAGCCTCCTATGCGTCAATGGCAATCAGCAGTTAGAGATGGATTATTGGAAGTAGGTGTGTTGCCTTACAATGGCTTTACTTATGATCATATTCATGGGACTAAGGTTGGAGGTACAATCTTTGACCATAATGGTCATAGACACACTGCAGCTGATCTTTTGGAATATGCTAACACCAACACAATCACTCTTCTTTTGCATGCCACCGTTCATAGAATCTTGTTTACAAAAAGCAAAGGTGGATTAAGTTCAAAGCCAATTGCACATGGAGTTCTATACAAGGATGCACGAGGGACAGAACACAGGGCATACTTGAATCATGGGACTAAGAATGAGATCATAGTATCAGCTGGTGCACTAGGTAGCCCACAACTTCTGATGTTGAGTGGAATTGGAGCAGCACATCACCTTAAGCAACATAACATCAGTGTAGTGTTACATCAACCATTTGTAGGACAAGGAATGTCAGATAACCCAATGAACTCTGTTTATGTCCCATCTCCTTCTCCGGTAGAGGTTTCCCTCATTTCTGTTGTTGGCATTACCAGCTTTGGCAGCTATATTGAAGCCGCTAGCGGCGCAACATTCACCGGTTCTCAAAGAGACTTCGGAATGTTTTCTCCCGAGATTGGTCAATTCTCAAAGTTGCCACCAAAGCAAAGGACCCCAGAAGCCATAGCAAAAGCAATAGAGAGGATGGAGAGCCTGGACCAAGAAGCATTCAGGGGTGGATTCATTCTAGAAAAAATCTTGGGGCCAATTTCAACGGGTCATTTGGAGCTCCGAAACACCGATCCAAATGAGAACCCTTTGGTAACATTTAACTACTTCCAAGACCCAAGAGACTTAGAAAGATGCATACAAGGCATGAACACAATTGAGAAAATAATAGATTCAAAGGCATTTTCTCCATTTAAATACACAAACATGTCAGTTTCTATGCTACTTAACATGACAGCAAATTCACCAGTAAATTTATTGCCTAAACACACAAATACTTCAATGTCTTTGGAACAATTTTGTAGAGACACTGTGATGACTATATGGCATTATCATGGTGGTTGTCAAGTTGGTAGGGTTGTTGATAGTGATTATAAGGTTGCTGGTGTCCACGCATTGCGCGTAATCGACGGTTCTACCTTTAATCATTCTCCTGGAACTAATCCTCAAGCCACTGTTATGATGCTTGGAAGGTATATGGGAGTCAAAATATTGAGAGAGAGATTTGCTGATGATGAAACCACTTAA 1743 0.4131 MSVLLWRLILLFLVGIVFSPKHCVSIKDTGRKYSFMQDATSAPIISFYDYIIIGGGTAGCPLAATLSKNHRVLVLERGGSPYGNPNITNLSAFGVALSDPSPSSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPRYVSEAEWDEKLVDESYKWVERVVAFQPPMRQWQSAVRDGLLEVGVLPYNGFTYDHIHGTKVGGTIFDHNGHRHTAADLLEYANTNTITLLLHATVHRILFTKSKGGLSSKPIAHGVLYKDARGTEHRAYLNHGTKNEIIVSAGALGSPQLLMLSGIGAAHHLKQHNISVVLHQPFVGQGMSDNPMNSVYVPSPSPVEVSLISVVGITSFGSYIEAASGATFTGSQRDFGMFSPEIGQFSKLPPKQRTPEAIAKAIERMESLDQEAFRGGFILEKILGPISTGHLELRNTDPNENPLVTFNYFQDPRDLERCIQGMNTIEKIIDSKAFSPFKYTNMSVSMLLNMTANSPVNLLPKHTNTSMSLEQFCRDTVMTIWHYHGGCQVGRVVDSDYKVAGVHALRVIDGSTFNHSPGTNPQATVMMLGRYMGVKILRERFADDETT* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0331 580 ProSitePatterns GMC oxidoreductases signature 1. 120 143 IPR000172 GO:0016614|GO:0050660
Mtr5g0331 580 Pfam GMC oxidoreductase 48 324 IPR000172 GO:0016614|GO:0050660
Mtr5g0331 580 Pfam GMC oxidoreductase 418 563 IPR007867 GO:0016614
Mtr5g0331 580 ProSitePatterns GMC oxidoreductases signature 2. 283 297 IPR000172 GO:0016614|GO:0050660
Mtr5g0331 580 Gene3D - 48 562 IPR036188 -
Mtr5g0331 580 PIRSF Alcohol_oxidase 32 579 IPR012132 GO:0050660
Mtr5g0331 580 SUPERFAMILY FAD-linked reductases, C-terminal domain 320 519 - -
Mtr5g0331 580 Gene3D - 165 512 - -
Mtr5g0331 580 SUPERFAMILY FAD/NAD(P)-binding domain 48 572 IPR036188 -
Mtr5g0331 580 PANTHER OSJNBA0019K04.7 PROTEIN 14 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0331 Mtr-Chr5 3105534 3110536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0331 4 573 Miscellaneous Gene Families AT5G51950 58.160 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0331 - - gmx:100777238 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0331 5 3105534 3110536 Mtr5g0331 5 3105534 3110536 ECH