Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0328 ATGATGAGAGGTTCAAAGCGTTTGGCTGTATCGGAACCTAACCGTGCTGATAACAACGAAACGCAATTTCGGAATAAAAGAATAATGGAAGGATCTCTCTTTGATGTCCATAGGGCTGAACCATCCCAACAACTGATGATGGCAACACCCTCATTGGATATGAAACGGGCAGAGTCATCCCAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGCTGGGTTCAAACACAATTAAAGAACCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCACGCTACAGGCATTATGGAAAAATTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACCAAGGCAGAAAATTCTACGCCCGGTGCCGGTGCTGGTGTTTCTTTTGCTGGGAAAAAGTTTTTGCCGGAAGTAACAAACAAAGAAAATAAAAATTTTGGAGAAAAATCTGGATCTCCTCCTGTTAGTACTACTACTACTACAAGTTTTGCTAGTCCATGGAGCCCTGGAATATTTTCGAACAGTCAAAATCAAAATCAAAATCAAAACCTTTTTACGTTTGGTGGAAATCAAAGTTCAGCCCCCTCCAACTCCAATCACAACGCTTCAGATGATGCGGATGCTGAAAATGAGGAGGAGGAGCCCAGTAGCCCATCAGTGAAGAAGTCGGAAGAGAAAGGTGTATCAGTTGTGCATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGACCCAACAGATAAAGATGTATGGAAAGATAGAGGAATGGGCAATCTATCCATTAAATGCAAAGAAGGGGTCGCCAAGGCTACCAAAGAGTCTAAACCTACAATTGTTGTTCGAAATGAGGTAGGGAAAATTCTTCTCAATGCCTTGTTGTATCCTGGAATCAAGACAAATCCACAGAAGAACTCTCTCGTTGCAATATTTCATACTGCGGGTAATGCCGATGGTGGTGGAGATGATATTGTTGTTGCACGTACATTTTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACTATTCAAGAATATGCTCCAGCATCTTGA 1071 0.4183 MMRGSKRLAVSEPNRADNNETQFRNKRIMEGSLFDVHRAEPSQQLMMATPSLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHATGIMEKFSDVVNWLKANATKAENSTPGAGAGVSFAGKKFLPEVTNKENKNFGEKSGSPPVSTTTTTSFASPWSPGIFSNSQNQNQNQNLFTFGGNQSSAPSNSNHNASDDADAENEEEEPSSPSVKKSEEKGVSVVHEVKCKLYVKSSDPTDKDVWKDRGMGNLSIKCKEGVAKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHTAGNADGGGDDIVVARTFLIRMKTEDDRNKLASTIQEYAPAS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0328 356 SMART ranbd_3 215 352 IPR000156 GO:0046907
Mtr5g0328 356 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 6 355 - -
Mtr5g0328 356 Gene3D - 115 355 IPR011993 -
Mtr5g0328 356 MobiDBLite consensus disorder prediction 148 206 - -
Mtr5g0328 356 SUPERFAMILY PH domain-like 225 353 - -
Mtr5g0328 356 MobiDBLite consensus disorder prediction 145 230 - -
Mtr5g0328 356 ProSiteProfiles Ran binding domain type 1 profile. 225 356 IPR000156 GO:0046907
Mtr5g0328 356 CDD RanBD_NUP50 227 353 - -
Mtr5g0328 356 PANTHER RAN BINDING PROTEIN 6 355 IPR045255 -
Mtr5g0328 356 Pfam RanBP1 domain 223 351 IPR000156 GO:0046907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0328 K14295 - gmx:100816975 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0328 5 3058035 3064783 Mtr5g0328 5 3058035 3064783 ECH