Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0311 ATGGCGTTGCAAGGAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAATGTCAATCAACACTATCGAGTATAGCAGCAAACAAGGCTGTATCTGCATCTGTGCCAAATGCTCTTGCTCCGGTCAAATTTTCGACCGATACGGAGAGACTTCAACATATTAATAGTATTCGTAAAGCTCCTGTTGGTGCTCAAATGAAGCGTGTTATTGATCTTCTTTTTGAGACTCGGCAGGCTTTAACATTGGAGCAAATAAATGAAACATGCCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAATCCAAAAGTAAGATACGATGGAGAAAGATTCTCTTATAAGTCAAAACATGCTCTTCGGGACAAAAAAGAGCTGCTTTTCCTGATACGCAAATTTCCCGAGGGCATTGCTGTTATTGACTTAAAGGATTCGTACCCAACTGTAATGGAGGACTTACAGGCTTTGAAAGGTGGCAGGGAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGTGGGATTGAATTGCCTCGTGATATGATTGATATAGAGAGGGATCTCCAAAAAAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCACAAATGGAAGGCATTTCATCCAAGCCTAAACCTAAGAAAAAGAAGAACGAAATCACCAAGAGGACCAAGCTGACTAACGCCCATCTTCCAGAGCTTTTTCAGAACTTGAACAACTCCTGA 813 0.4121 MALQGKLDRFKKQQEKCQSTLSSIAANKAVSASVPNALAPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0311 270 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 269 IPR016656 GO:0005673|GO:0006367
Mtr5g0311 270 PANTHER BNAA02G21830D PROTEIN 1 269 - -
Mtr5g0311 270 MobiDBLite consensus disorder prediction 218 270 - -
Mtr5g0311 270 Pfam TFIIE beta subunit core domain 63 122 IPR003166 GO:0006367
Mtr5g0311 270 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 49 124 IPR003166 GO:0006367
Mtr5g0311 270 PIRSF TFIIE-beta 5 269 IPR016656 GO:0005673|GO:0006367
Mtr5g0311 270 Pfam TFA2 Winged helix domain 2 124 181 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0311 Mtr-Chr5 2892574 2897268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0311 K03137 - gmx:100802433 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0311 5 2892574 2897268 Mtr5g0311 5 2892574 2897268 ECH
Mtr5g0311 5 2892574 2897268 Mtr8g3426 8 44835504 44838533 PCT