Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0306 ATGTTTCGTTCTTCAAAATGGAGAAGTGAGAAGAATAGGATTAAAGCTGTTTTTAAGCTTCAATTCAATGCTACTAAGGTGTTACAATCAGGGGTGGATGCATTGGTGTTGTCAATAGTTCCTGGTGACATTGGAAGACCAACAAAAAGATTAGAGAAAGCTACGGTTCAAGATGGAAATTGTCGGTGGGAGAATCCGGTATACGAAACAGTCAAGTATTATCAGGATCCGAAGACCAGAGAAATCAACGATAAAATATATAAATTTTTGCTCTCAACGGGGTTATCAAAAGCTAGCGCCGTCGGGGAGGTTTCTGTGAACTTTGCTGATTATGTAGATGCCACAAAGCCTTCCCATGTCTCTCTTCCCATCAGGAATTCTCATGGTGATGCTGTTTTGCATGTATCTATCCAGAGAATGCAAGAAAAAAATGATCAAATTCAAAGAGAGGAAGATGAATGTGAAGATATAAAACTAAAATTCGATGATATGAGCTCAAGAAACCAATTCAGCAACGGTGATACAGATGAAAGCACTAAAAGTTATTTTTCTGAAGATGTCTCTTCCAAAGCAATAATCAACAGGACGTCTAGTGGGTCCGACGTTACATTGTCAAGTTCTGATGACAGCTCTGGAGTTGATACTCCCTGCGAACTTGGACTGAGAAAAACAAACATTCAACCCACCACAAACCAGTTTGTTCCAGTTATGTCCCGTGCCGCAGAATCTCCAAATGCTGCTGTTAATGCCTTGACACCGATGCATGATTTACATCAGAGATCACAATGGGGTTGGTCATCTAGCTCAGAGCTCGGGTTAAGCATGGGCGATTCAACAAACGGTTCTCAAAATGCCCTTTCCAAGGAAAGTTCCCAAGAGGCATCCCATTTGGAGATTGAGAGACTCAAAGCTGAACTTGCTGCTTTGGCGAGGCACGTGGATGTGTCGGACATGGAACTACAGACCCTTAGGAAACAAATTGTAAAGGAAAGCAAAAGAGGGCAGGATCTCATGAAGGAAATCATTATCTTGAAAGATGAAAGGGACGCACTCAAGACAGAATGTGACAATGTCAGGTCTTTCCACAAACGCATGGACGATGCCAAAGTGAGAAACAGGTCACAGTTGGAAAGTGGAGATCATCATGCCTTTGTCGAAGAAATCAGACAAGAATTGAATTATGAGAAAGACACGAATGCAAATCTCCGATTACAGTTAAAAAAGATGCAAGAATCAAATGCTGAATTGGTTCTTGCCGTGCAGGACCTGGAAGAGATGTTGGAGCAGAAAAATATGAATATGTCTAAACATTCCAATGGACAGGAACACAATAAAAATTCCCAAGAGTTAGAGATGAAACTCTCACAATGTGAAACAAGTGATGATGAAGATCAAAAAGCATTGGATGATCTTGTCAAGGAGAAAAGTGATGCCAAGGAGACACACTTGCTTGAGAAAAAAATTATAGACTTGTATGGTGAAATTGAAATGTATAGGAGGGACAAAGAGGAGTTAGAGATGCAAATAGAGCAGATTGCACTAGACTATGAGATATTAAAACAGGAAAACCACAAGCTTGTACATAAGCTAGAGCAAAGCCAACTGCAGGAACAGTTAAACATCCAATATGAGTGTTCATCTCCTCCTGGTGCTATGAATGGCATTGAAACTCACATTGAGAATCTGGAAAAAGAACTCAAGGAACAGTCAGAAGATTTCTCAAATTCTCTAGCTACCATTAAGGTACTAGAAACCCATATCAGAAGATTAGAGGAGGAAATGGAGAAACAAGTACAAGGATTTGAAGCTGATATAGAAGCAATGGCACGTGAAAAAGTCGAGCAAGAGCAAAGAGCCATCCAAGCCGAGGATGCGTTGCGAAAGACCAGACTGAAAAATGCTAATACAGCTGAAAGGCTTCAAGAGGAATTCCAGAGACTCTCAATGCAAATGACTTCTACCTTTGATGAAAATGAGAAGGCTACCTTGAGAGCTTTGACAGAAGCATGTGAACTACGATCGCAGAAAACTATACTGGAAGAAATGCTGCATAAAGTCCAAGAAGAGCTTCAGTCAACTAAAACTGATTACGAGGTAAAACTGAACGACCTTTCCAATCAAATAGATACAATGAAATTTCAGATACAGCAGATGTTGGTGGAAATCGAAGACAAGTCCAAGCAACTCGAAAATCAGAAGAAGCTTGGGGAACAAGTTAATAGGGATTTCTCTGAGGAGTTTGATATGCTAAAAGCTGAGAATGAAAATCTTAAACTAGAGATTTCGCTCTTAAATGAACAAGTAGAAGGAAAAGAAATATTAAGGACTGACTTGGAACTTATGAAGAAATCAATTGAGGAATCTGAAACATTGTTACATCAAGGAACTGTGGAAAGAGATGAACTTGTGAGCACAATTGCGTCATTGAAGAAGGAAGCGGAACATTCGCTTAACGAGCTAAGTAAAATGAGAAATTTCAAGGAAGAAAAAGAAGAAGAGGCTAGACTATTGAAGTCTGAGTTGGAAGCTATTAGAGTTCAATGCAGTGATTTGAAAAAGTCACTTTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAGCAAATTTCCCAGCTAAAGAGTGAAATAAAGAAGAAAGGTGATGCATTAACCAGCATTGAGAAGAGATTCAGGGATAGTAACGGACGCAACCAACTTTCTGATGGATCTAAAACCATCCCAATCAACAAAAAAATTGCTTCCAGTCCTCATCATTCAAAAGAAATGGCAAGTCTGAGAGAGAAAATAAAAATGCTTGAGGGCCTGATAAAGTCAAAGGAAACTGCCTTGGAAACTTCAACAACTTCATCTATGAAGAAGGAAAAGGAACTTCAGAGCAGAATTGTGGAGCTGGAGAACAAAGTGGAGGAATTTAATCAGAATGTTACTTTACACGAGGATAGAAGTATTAAAAGTTCAAATGAGATATCGGAAAAAGTAAGAAATAGATTGGAACACGCGGACAACAGTCTTAGTGGCGTATTGACCGAATTGTCGTCATTGAAGGAAAGAAACAAATCAATGGAAAGCGAGCTCAAAGAGATGCAAGAGAGATACTCAGAAATGAGTCTCAAATTTGCTGAGGTAGAAGGTGAAAGACAAATTCTTGTTATGACTGTAAGAAACCTCAAGAGTGTCCACAAGGGCTGA 3189 0.3945 MFRSSKWRSEKNRIKAVFKLQFNATKVLQSGVDALVLSIVPGDIGRPTKRLEKATVQDGNCRWENPVYETVKYYQDPKTREINDKIYKFLLSTGLSKASAVGEVSVNFADYVDATKPSHVSLPIRNSHGDAVLHVSIQRMQEKNDQIQREEDECEDIKLKFDDMSSRNQFSNGDTDESTKSYFSEDVSSKAIINRTSSGSDVTLSSSDDSSGVDTPCELGLRKTNIQPTTNQFVPVMSRAAESPNAAVNALTPMHDLHQRSQWGWSSSSELGLSMGDSTNGSQNALSKESSQEASHLEIERLKAELAALARHVDVSDMELQTLRKQIVKESKRGQDLMKEIIILKDERDALKTECDNVRSFHKRMDDAKVRNRSQLESGDHHAFVEEIRQELNYEKDTNANLRLQLKKMQESNAELVLAVQDLEEMLEQKNMNMSKHSNGQEHNKNSQELEMKLSQCETSDDEDQKALDDLVKEKSDAKETHLLEKKIIDLYGEIEMYRRDKEELEMQIEQIALDYEILKQENHKLVHKLEQSQLQEQLNIQYECSSPPGAMNGIETHIENLEKELKEQSEDFSNSLATIKVLETHIRRLEEEMEKQVQGFEADIEAMAREKVEQEQRAIQAEDALRKTRLKNANTAERLQEEFQRLSMQMTSTFDENEKATLRALTEACELRSQKTILEEMLHKVQEELQSTKTDYEVKLNDLSNQIDTMKFQIQQMLVEIEDKSKQLENQKKLGEQVNRDFSEEFDMLKAENENLKLEISLLNEQVEGKEILRTDLELMKKSIEESETLLHQGTVERDELVSTIASLKKEAEHSLNELSKMRNFKEEKEEEARLLKSELEAIRVQCSDLKKSLFEDEAEKEKLRKQISQLKSEIKKKGDALTSIEKRFRDSNGRNQLSDGSKTIPINKKIASSPHHSKEMASLREKIKMLEGLIKSKETALETSTTSSMKKEKELQSRIVELENKVEEFNQNVTLHEDRSIKSSNEISEKVRNRLEHADNSLSGVLTELSSLKERNKSMESELKEMQERYSEMSLKFAEVEGERQILVMTVRNLKSVHKG* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0306 1062 Coils Coil 1004 1045 - -
Mtr5g0306 1062 MobiDBLite consensus disorder prediction 197 213 - -
Mtr5g0306 1062 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1062 - -
Mtr5g0306 1062 Coils Coil 922 942 - -
Mtr5g0306 1062 Coils Coil 637 657 - -
Mtr5g0306 1062 Coils Coil 133 167 - -
Mtr5g0306 1062 Coils Coil 954 981 - -
Mtr5g0306 1062 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1062 - -
Mtr5g0306 1062 MobiDBLite consensus disorder prediction 268 292 - -
Mtr5g0306 1062 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Mtr5g0306 1062 Coils Coil 552 632 - -
Mtr5g0306 1062 Coils Coil 676 774 - -
Mtr5g0306 1062 MobiDBLite consensus disorder prediction 197 226 - -
Mtr5g0306 1062 Coils Coil 488 536 - -
Mtr5g0306 1062 Coils Coil 385 433 - -
Mtr5g0306 1062 Coils Coil 799 889 - -
Mtr5g0306 1062 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 142 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0306 Mtr-Chr5 2844358 2849424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0306 - - gmx:100792602 1405.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0306 5 2844358 2849424 Mtr5g0306 5 2844358 2849424 ECH
Mtr5g0306 5 2844358 2849424 Mtr8g3435 8 44928151 44933243 PCT