Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0288 ATGGGACAAGAGTTGGATCTCAATGACAAGTCTACTGTGATTCTCAGTCCCAATTCTGTTCTTCCATCTCATCAAAACTGTTTGAATGTGAAGAAGGAGAAATCATGTAGATCTCATAGACTAGAAGAGAATATAGAAACTAGAAGAGGTTCCATTTATCTGAGTCCAAATCAGAAGAAAATGGCCACAATTCAGGAAAGGAAAAAGATAGAAATTTCAAGTAGGACTAGTGACAACTCTTATTCGGGTAGCATTTTTTATGCATTGTGTAGTGGTTCAGATGATGAAGATTCTGTTGAGGTTGAGACACCTTCTTCAGTAATATCTCAGGATTCACAATTGAGTTCTCAATCTCCATCGGTTTCTTGTTCCTGTACTTGTATGGATCACAACATATCAAGTAGTTTTATTGAATTTTGCATAAATTCAGGTGTTTGTGATAAAAAATCTAGTGTAGTAGAAGTAGTAGGTTCTGTAAATTCAAAGATTAGAAGTAATAAGGTTAATGATTCTCTTGTAATTGGTAATAATTCTCCTCTTCAAAAAGTGAAAATAACTCATTCTCACCAACCATATCCATCAGAAAGTGATTGTTCATCAAGAGTGAGTTCAAAAGTCCCATTCACTCCAATCAGAAAAAGGCTAAATCCTTTCACAAAGTCAAAGAAAGTTGCAAGAAACATGGCTTGTCAAAAATCTTTGTTGAATGACTTTTCCAACACAACAAAAGGTGCTGACATTGTTTCTGAATTTGTCAATAGAGAAATTAAGGATTCTGGTCTAGCATGCTCACATGTTCATTTGCATGGCAATCTCAAGATGAAAAACAAACAAGGACTTCCTTATTTTGAGTTTAAGGTAAATTCCCCTGAAGATGTCTTTGTTGCAAAGACATGGAGAGTAGGTAATGCTTTAAATTGGGTATATACCTTTCACTCTTTTCATACTAGAACGAAGAGTAATGCAGGCTTGGGATCTCAACATTGTGACAAAGATTCATCATCAATGGTAGCACAGATGCTAGTTTCTTGTAGTTTATGTTCTGAATTAGAAGATGGAGTAATTGGAAACTATATGGTTACAGAATTTGTGTTGTATGATTTTACTCATTCAAGAAAAAGTGTTATACCAAAGAAAAAGTCTTACAGCAAACAAGATGCTTCGAAAACTCTGAATGCTTCTAGCCTTGAAAGTGCTGCTATTGTTTTGCGAATACCTTTTCATAAGAGAGAAAGCTTGAAATACAAAAGAGGTGATAGAATGAAAACTAAAGCACATTCCAAACAAAGTGATGTCTCTTCACCAGTAGAGCAAGTGAAGGTGGTACTACCAATTGGAAACCATGGTTTGCCGAGTGCTGAAAGTGAGGGTCCTTCATCGTTACTTGATCGATGGAAACATGGTGGAGGTTGCGACTGTGGTGGCTGGGACATGGCCTGCCCTCTTATTCTTTTAGGCAATCCTAGTGTTCAATTTCATGAAGATCGCCCTCTTGTGGAGAAATATCAACCACTAGAACTTTTCTCTCAGCCTCAGGGAACCAAAGAAATTAATCCTACCTTTAGCATGACATTAGTTGAAGAGGGGCAATATGCAGTTGATTTCCATGCCAAATTATCTTCATTACAAGCTTTCTCCATTTGCGTCGCCATTTTGCATGGCACATCTACCTTCAGTGCTAAGGCAGAACAGGCGAAAAATCAACCGTTATCTCAATGCAGTTCGTTAAATACACTTATTGAAGAAGTAGAATTATTCATCAAATCAGTCATAGCAGAGGAGAAGAGAAAAATGTCTAATATTCACAAGGGAATTCATCGACCCTCTATGCTGAACCAGCCTTTTTCGCCTATTGGGCGAGTATGA 1866 0.3708 MGQELDLNDKSTVILSPNSVLPSHQNCLNVKKEKSCRSHRLEENIETRRGSIYLSPNQKKMATIQERKKIEISSRTSDNSYSGSIFYALCSGSDDEDSVEVETPSSVISQDSQLSSQSPSVSCSCTCMDHNISSSFIEFCINSGVCDKKSSVVEVVGSVNSKIRSNKVNDSLVIGNNSPLQKVKITHSHQPYPSESDCSSRVSSKVPFTPIRKRLNPFTKSKKVARNMACQKSLLNDFSNTTKGADIVSEFVNREIKDSGLACSHVHLHGNLKMKNKQGLPYFEFKVNSPEDVFVAKTWRVGNALNWVYTFHSFHTRTKSNAGLGSQHCDKDSSSMVAQMLVSCSLCSELEDGVIGNYMVTEFVLYDFTHSRKSVIPKKKSYSKQDASKTLNASSLESAAIVLRIPFHKRESLKYKRGDRMKTKAHSKQSDVSSPVEQVKVVLPIGNHGLPSAESEGPSSLLDRWKHGGGCDCGGWDMACPLILLGNPSVQFHEDRPLVEKYQPLELFSQPQGTKEINPTFSMTLVEEGQYAVDFHAKLSSLQAFSICVAILHGTSTFSAKAEQAKNQPLSQCSSLNTLIEEVELFIKSVIAEEKRKMSNIHKGIHRPSMLNQPFSPIGRV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0288 621 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 394 621 - -
Mtr5g0288 621 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 4 394 - -
Mtr5g0288 621 Pfam Domain of unknown function (DUF3527) 394 554 IPR021916 -
Mtr5g0288 621 Pfam Domain of unknown function (DUF3527) 266 391 IPR021916 -
Mtr5g0288 621 PANTHER EXPRESSED PROTEIN 4 394 - -
Mtr5g0288 621 PANTHER EXPRESSED PROTEIN 394 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0288 Mtr-Chr5 2667264 2670740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0288 - - mtr:MTR_5g010160 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0288 5 2667264 2670740 Mtr5g0288 5 2667264 2670740 ECH
Mtr5g0288 5 2667264 2670740 Mtr8g3460 8 45094305 45098552 PCT