Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0283 ATGGGCATTGCCATAACATCACTACCACTCTCAGTATCTCAACAAAAACATCTTAAAATCAAACCAAACACTAATTCCAATTATTCTAAGACTAACAACACATACTTACTAATCCAATGTTGTCACAGCCAAACAGACCCTATAGATTCACTAACCAACAACAATGGACATACCAGGTTTCCAGAGAAAAATCCTCTGATAAACCCTTTACTAGCCTCCAAAGTTGGTGCAGTGCCTCCAAGGCCTAGAAGAATAATTCTTGTTAGACATGGAGAGAGTGAAGGGAACGTGGATGAGAGTGTTTACACAAGGGTACCTGATCCCAAAATAGGCCTCACAAATAGGGGTAGGGTTCAAGCAGAGGAATGTGGACAAAGAATCAAGAACATGATTGAAAAAGATAGTGATGAAAATTGGCAACTCTACTTTTATGTGTCTCCATATAGAAGGACTCTCGAAACTTTGCAAAGCTTAGCTCGTCCTTTTGAACGTTCGAGAATTGCTGGATTCAGAGAAGAGCCTCGGATTAGAGAACAAGATTTCGGGAATTTTCAAAATAGAGAGTTGATGAAAGTTGAAAAAGCGCAACGCCATCTTTATGGTCGTTTCTTTTACCGATTTCCAAATGGTGAATCTGCGGCTGATGTATACGATAGAATCACAGGATTTAGAGAAACACTAAGAGCAGATATTAATATTGGACGGTATCAACCACCTGGGGAGAAGAATTTTGACGTGAACTTGGTCATCGTGTCGCATGGTTTAACACTTAGAGTTTTTCTTATGAGATGGTATAAATGGACGGTTGAACAATTCGAGGGTCTCAACAACTTTGGCAATGGAGGCGAGCTTGTCATGGAAAAGGGTTATGGTGGAAGGTATAGCTTATCAATGCATCATGATGAACAAGAGTTAAGACAGTTTGGATTGACTGATGAAATGCTGATTGATCAAGAATGGCATAAATTTGCAAAGCCTGCTGATCTGAATTATGATTGTCCAATGGTGAATTCCTTCTTTCCTCATCTTCATGAAGAAGCAAACAGAAGCCAACAAAAAGGGTAG 1065 0.3962 MGIAITSLPLSVSQQKHLKIKPNTNSNYSKTNNTYLLIQCCHSQTDPIDSLTNNNGHTRFPEKNPLINPLLASKVGAVPPRPRRIILVRHGESEGNVDESVYTRVPDPKIGLTNRGRVQAEECGQRIKNMIEKDSDENWQLYFYVSPYRRTLETLQSLARPFERSRIAGFREEPRIREQDFGNFQNRELMKVEKAQRHLYGRFFYRFPNGESAADVYDRITGFRETLRADINIGRYQPPGEKNFDVNLVIVSHGLTLRVFLMRWYKWTVEQFEGLNNFGNGGELVMEKGYGGRYSLSMHHDEQELRQFGLTDEMLIDQEWHKFAKPADLNYDCPMVNSFFPHLHEEANRSQQKG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0283 354 CDD HP_PGM_like 84 298 IPR013078 -
Mtr5g0283 354 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 26 344 - -
Mtr5g0283 354 PANTHER OS06G0109000 PROTEIN 26 344 - -
Mtr5g0283 354 SMART PGAM_5 84 260 IPR013078 -
Mtr5g0283 354 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 87 96 IPR001345 GO:0003824
Mtr5g0283 354 Gene3D - 81 320 IPR029033 -
Mtr5g0283 354 Pfam Histidine phosphatase superfamily (branch 1) 85 277 IPR013078 -
Mtr5g0283 354 SUPERFAMILY Phosphoglycerate mutase-like 82 292 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0283 Mtr-Chr5 2637704 2639889 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0283 - - mtr:MTR_5g010090 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0283 5 2637704 2639889 Mtr5g0283 5 2637704 2639889 ECH