Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0267 ATGCAATCACACTTTTTCTCACATTCGCTCCATTCGTTTCCAAAACCATTTAAGAGCCAGCACTTTTTATCTTTCACCACCTCACTTATATCCTCTTCCATTTTTCCCCCTCCTACTCCTCGCTGCAATCTCAAATTACCACCACGCTTTCAATTCACCAACATTTTTCGGTCTACAACGGGATTCGTTCGTGCTTCCGAGGATGACTCTGTTGCCGAAAATTCCGATTCTCAATGCCAATTGGCAACACAGAATGTGTCTTCTGATGATGCATCCATGACAGTTTTGAAGTTTATGCTGTTCTCCGCGTTCTTCGCACTTCAAGATGCTTTTCCGGCAGTTGCTGCTTCTGATTTTGCTACTGGTTTGAATTCAATTCCTATATTTGGAGATGTCGGTGACTTAAGCACAGGTTTTGCTTCAGCATTTTTGCTGATATTTTTCTCTGAACTGGGAGACAAGACTTTTTTCATTGCAGCATTGTTAGCAGCTAGAAATTCAGCCAGTGTTGTTTTCGTTGGGACATTTGGCGCACTTGCGGCAATGACTGTCATTTCTGTCGCTCTAGGTCGAACTTTTCATTATGTCGACGAACTCTTGCCGTTCAGGTTTGGAGAAACTGATCTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTCGGGGTCTCTACCCTGCTGGATGCCTCATCTAGTGATAGCCAAAAATCAGATGATGAACAGAAGGAGGCAGAGTTAGCAGTTTCCGATTTTTCTGGAGATGGTGCTGGAATACTAGCTGCTGCTAGCACAATTGTCAGCACTTTTCTCTTAGTTTTTGTTGCTGAGTGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCGCCCTTGGGAGTCATAGCTGGATCACTGGCTGGTCATGGTGTTGCAACTTTGATAGCCGTACTTGGTGGCTCTTTACTGGGGACGTTTTTGTCGGAGAAGGTCATTGCCTACATTGGAGGAGTGCTCTTTCTCGTCTTTGCTGCAGTAACCGTGTTTGAAATTGTACAATAG 1056 0.4403 MQSHFFSHSLHSFPKPFKSQHFLSFTTSLISSSIFPPPTPRCNLKLPPRFQFTNIFRSTTGFVRASEDDSVAENSDSQCQLATQNVSSDDASMTVLKFMLFSAFFALQDAFPAVAASDFATGLNSIPIFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAELAVSDFSGDGAGILAAASTIVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLIAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTVFEIVQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0267 351 PANTHER PROTEIN PAM71, CHLOROPLASTIC 68 351 - -
Mtr5g0267 351 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 68 351 IPR001727 -
Mtr5g0267 351 Pfam Uncharacterized protein family UPF0016 141 224 IPR001727 -
Mtr5g0267 351 Pfam Uncharacterized protein family UPF0016 269 342 IPR001727 -
Mtr5g0267 351 ProSitePatterns Uncharacterized protein family UPF0016 signature. 150 159 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0267 Mtr-Chr5 2481517 2486665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0267 - - lang:109331470 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0267 5 2481517 2486665 Mtr5g0267 5 2481517 2486665 ECH