Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0260 ATGCGTAGCCGGGGATCACAAAACCGGCTAAATGGTAACTCATTTGGATCTCGAGTTTCTGCTCTCATCTTTTCCATGATTGCTACCATGGCCACTATTTATGTTGCCGGCCGACTATGGCAGGATGCAGAGAGTAGGGTGTATTTAATAGAACAGCTTGAAAAAAGAACTTCTCAGGGTCAATCTGCCATATCTGTTGATGATACATTGAAAATCATAACCTGCAGGGAACAACAAAAGAAGTTGTCTGCCCTAGAGATGGAGTTATCTGCAGCTAGAAAGGAAGGATTTGTTCCAAAGCAACTGTCAGTGAACAATGAGAAGCAACCTACAAAAAAGATTCTTTCGGTTATTGGAGTAATGACAACCTTTGGTAGAAAAAAGAACAGAGATGCAATCCGTAAGGCATGGATGCCAACAGGTGCATCTATAAAAAATCTTGCAGAACAGAAAGGCATCATTGTGAGATTTGTAATAGGAAGAAGTGCAAATCGTGGAGACAGTTTGGACAAAGAGATTGAAACAGAAAATAGTCAGACCAATGACTTCATCATTCTTGATGATCAAGTAGAGGCAGTTGAAGAGAGTGCAAAAAAGACAAAGTCGTTCTTCATTTATGCTGTGGACAACTGGGATGCTGAGTTTTATGCTAAGGTCAATGATGATGTCTATGTTAATCTTGATGCCTTTGGAGGAGTGATAACTTCTCATTTGGAAAAACCCCGTGTATATATTGGTTGTATGAAATCGGGTGAAGTTTTCTCTGACCCGACACATAAATGGCATGAGCCAGACTGGTGGAAATTTGGTGATGGAAAATCGTACTTTCGACATGCTTCAGGTGAGGTCTATGCCATTTCAAAAGCATTGGCTCAGTTTATTTCAATAAATAGATTTATTCTTCGTACATATGCACATGATGATGTAAGCACCGGATCATGGTTTATTGGGCTGGACGTGATGCACATTGATGAAAATAAGTTTTGCTGCTCATCCTGGTCCACAGGGGCAATTTGTGCATCCGTATGA 1029 0.4052 MRSRGSQNRLNGNSFGSRVSALIFSMIATMATIYVAGRLWQDAESRVYLIEQLEKRTSQGQSAISVDDTLKIITCREQQKKLSALEMELSAARKEGFVPKQLSVNNEKQPTKKILSVIGVMTTFGRKKNRDAIRKAWMPTGASIKNLAEQKGIIVRFVIGRSANRGDSLDKEIETENSQTNDFIILDDQVEAVEESAKKTKSFFIYAVDNWDAEFYAKVNDDVYVNLDAFGGVITSHLEKPRVYIGCMKSGEVFSDPTHKWHEPDWWKFGDGKSYFRHASGEVYAISKALAQFISINRFILRTYAHDDVSTGSWFIGLDVMHIDENKFCCSSWSTGAICASV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0260 342 Coils Coil 75 95 - -
Mtr5g0260 342 Gene3D - 104 334 - -
Mtr5g0260 342 PANTHER HEXOSYLTRANSFERASE 1 338 - -
Mtr5g0260 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr5g0260 342 Pfam Domain of unknown function (DUF4094) 17 94 IPR025298 -
Mtr5g0260 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 338 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0260 Mtr-Chr5 2415935 2423973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0260 22 342 Glycosyltransferase AT5G53340 66.667 8.37e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0260 K20854 - gmx:100802753 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0260 5 2415935 2423973 Mtr5g0260 5 2415935 2423973 ECH