Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0251 ATGTCTTCTTCCAAAGATGCAGACCCAACCCTAGGTTACCTCACTCGAAAAGATACCGAAGTCAAGCTTCCACGTCCAACTAGGGTTAAGAACAAAACCCCCGCTCCAATTCAAATCACAGCGGAGCAGATTCTCCGCGAAGCTAGGGAGCGTCAAGAAGCTGAGATCCGTCCTCCAAAGCAGAAAATCACCGATTCAACAGAACTCGGCGAGTATCGTCTCCGGAAAAGAAAGGAATTCGAGGATTTAATCCGGAGAGTTCGGTGGAATGTCAGTGTTTGGATTAAGTATGCACAGTGGGAAGAGTCGCAGAAAGATTTTACACGTGCACGTTCGGTTTGGGAACGAGCATTGGAAGTTGATTATAAGAATCATACTTTGTGGTTGAAGTATGCTGAAGTTGAGATGAAGAATAAGTTTATTAACCATGCGAGGAATGTTTGGGATCGCGCTGTTACTCTTTTGCCACGAGTGGATCAGTTGTGGTATAAGTATATTCATATGGAGGAGATGCTTGGCAATGTTGCGGGGGCGAGACAGGTTTTTGAGAGATGGATGAAATGGATGCCGGATCAGCAAGGATGGCTATCTTATATAAAATTTGAGCTGAGATATAATGAGATTGAACGAGCTAGAGGGATTTTCGAGAGATTTGTATTGTGTCATCCTAGGGTTGGTGCTTGGATACGTTATGCGAAGTTTGAGATGAAGAATGGCGAGGTTCCTAAGGCGAGGAATGTTTATGAAAGAGCGGTGGAGAAGCTTGCGGATGATGAGGAAGCTGAGCTGCTTTTTGTGGCTTTTGCGGAGTTTGAGGAAAGGTGTAAGGAGGCTGAGCGGGCGAGGTGTATTTATAAATTTGCACTTGATCATATTCCGAAGGGGAGGGCTGAGGATTTGTATCGGAAGTTTGTGGCATTTGAGAAACAGTATGGTGATAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAAGATGAAGTGAGGAAAAATCCGTTGAATTATGATTCATGGTTTGATTATATAAGATTGGAAGAGAGTGTTGGGAATAAGGAAAGAACTAGGGAGGTTTATGAGAGAGCTATAGCCAATGTTCCTCCTGCTGAGGAGAAGCGATACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTCTATGAAGAACTCGATGCTGGAGACATGGAGCGAACAAGAGACGTGTACAAGGAGTGTCTCAACCAGATACCTCACCAGAAGTTCTCATTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCACAGGTGCTCGTCAAATATTAGGGAATGCTATTGGAAAGGCTCCTAAAGATAAGATATTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATAGATGCAGAAAACTATATGAAAAGTATTTGGAGTGGTCACCTGAAAATTGCTATGCATGGAGCAAGTATGCAGAACTAGAGAGATCTTTAGCTGAGACTGAACGAGCTAGAGCAATATTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAGTTGTTGTGGAAGGCATACATTGATTTTGAAACTGCCGAGTGTGAATTTGAGAGAGCAAGAGCGCTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGCAGAGCTATGCAGAGTTTGAAGCAACAGCTATAGATGAGAGTTTAGAATTATCGGAACAAGAACAAAAGGAGCAGTGCCTTCAGCGTGCGAGAAAGGTGTTTGAGGATGCTCTAAACCACTTCAGATCATCAGCTCCGGATTTAAAAGAAGAAAGGGCAATGCTATTAGAGAAATGGCTCAACTTGGAGGCTTCATCTGGGGAGCTAGGTGATGTCAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGAAGACAAGTTTCTACTGAAGATGGTTCTTCTAGAATCGAAGAATTTATCGACTATCTATTCCCTGAGGAAACGCATACAACCAATCTCAAGATCATGGAAGCTGCTTACAAATGGAAGAAGCAAAAATTGTCTAATGAATAA 2082 0.4284 MSSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGAWIRYAKFEMKNGEVPKARNVYERAVEKLADDEEAELLFVAFAEFEERCKEAERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLAETERARAIFELAIAQPALDMPELLWKAYIDFETAECEFERARALYERLLDRTKHLKVWQSYAEFEATAIDESLELSEQEQKEQCLQRARKVFEDALNHFRSSAPDLKEERAMLLEKWLNLEASSGELGDVSLVQSKLPKKLKKRRQVSTEDGSSRIEEFIDYLFPEETHTTNLKIMEAAYKWKKQKLSNE* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0251 693 PANTHER PRE-MRNA SPLICING FACTOR 22 691 IPR045075 GO:0000398
Mtr5g0251 693 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Mtr5g0251 693 SUPERFAMILY TPR-like 81 205 IPR011990 GO:0005515
Mtr5g0251 693 MobiDBLite consensus disorder prediction 11 27 - -
Mtr5g0251 693 Gene3D Tetratricopeptide repeat domain 122 320 IPR011990 GO:0005515
Mtr5g0251 693 Gene3D Tetratricopeptide repeat domain 321 535 IPR011990 GO:0005515
Mtr5g0251 693 SMART hat_new_1 469 501 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 436 467 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 276 310 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 239 274 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 105 137 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 539 570 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 354 388 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 320 352 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 206 237 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 139 171 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 503 537 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 71 103 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 398 434 IPR003107 GO:0006396
Mtr5g0251 693 SMART hat_new_1 173 204 IPR003107 GO:0006396
Mtr5g0251 693 SUPERFAMILY TPR-like 267 523 IPR011990 GO:0005515
Mtr5g0251 693 Coils Coil 534 554 - -
Mtr5g0251 693 Gene3D Tetratricopeptide repeat domain 540 669 IPR011990 GO:0005515
Mtr5g0251 693 PANTHER - 22 691 - -
Mtr5g0251 693 SUPERFAMILY TPR-like 194 262 IPR011990 GO:0005515
Mtr5g0251 693 MobiDBLite consensus disorder prediction 1 34 - -
Mtr5g0251 693 Coils Coil 495 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0251 Mtr-Chr5 2301512 2307849 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0251 K12869 - gmx:100811745 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0251 5 2301512 2307849 Mtr5g0251 5 2301512 2307849 ECH