Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0249 ATGGCGTCTCAAGATTCGGCTGGAAAGACAAATGATCAGTCTAAAGTCTCCGCAATCTCCGGTGAAGGTGCCAAACCTCCTAATCATGCTTTTCTTACTATCTGCAAATCTCTTGTCGCAGGTGGAGTCGCTGGTGGAGTTTCACGGACAGCTGTGGCTCCTCTAGAGAGATTGAAGATTCTGCTGCAGGTTCAAAATCGTCACAATGTAAAATACAACGGAACTGTTCAGGGATTAAAATATATATGGAAAACTGAGGGTTTTAGGGGAATGTTTAAAGGAAACGGAACCAATTGTGCTCGTATTATCCCAAATTCAGCAGTGAAGTTCTTTAGCTATGAGCAAGCATCTAATGGTATTCTAAGTCTCTATCGGTTGCAAACTGGAAATGAAGAAGCTCACCTCACTCCTCTTCTGCGCCTTGGAGCTGGGGCATGTGCAGGAATCATTGCAATGTCTGCAACTTACCCAATGGACCTGGTGCGAGGACGCCTAACTGTACAGACAGAAGCATCTCCTCATCAATACAGAGGAATTTTTAATGCTCTTTCAACTGTCTTCCGGGAAGAGGGCGCTAGAGCATTGTATAAAGGATGGTTGCCTTCAGTCATAGGAGTTATACCGTACGTGGGTCTAAATTTTTCTGTATATGAATCTCTAAAAGACTGGTTGATTCAAACAAAACCACTTGGAATTGCTCAAGACTCAGAGCTAAGTGTGACCACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTATTGGCCAGACAGTGGCATACCCCCTTGATGTTATTCGCAGAAGAATGCAGATGGGGGGCTGGAAAGGCGCTGCTTCCGTTGTCACTGGTGATGGGAAGGGTAATCTTGAGTATACTGGCATGGTTGATGCATTCCGTAAAACTGTTAAGTATGAGGGATTTGGAGCTTTATACAAGGGCTTAGTACCCAATTCAGTCAAGGTGGTCCCTTCCATAGCCATTGCCTTCGTGACATACGAGATGGTCAAGGATGTTCTAGGAGTTGAAATGAGAATATCTGACTGA 1041 0.4496 MASQDSAGKTNDQSKVSAISGEGAKPPNHAFLTICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNRHNVKYNGTVQGLKYIWKTEGFRGMFKGNGTNCARIIPNSAVKFFSYEQASNGILSLYRLQTGNEEAHLTPLLRLGAGACAGIIAMSATYPMDLVRGRLTVQTEASPHQYRGIFNALSTVFREEGARALYKGWLPSVIGVIPYVGLNFSVYESLKDWLIQTKPLGIAQDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMGGWKGAASVVTGDGKGNLEYTGMVDAFRKTVKYEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEMRISD* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0249 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 337 IPR018108 -
Mtr5g0249 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 119 IPR018108 -
Mtr5g0249 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 135 223 IPR018108 -
Mtr5g0249 346 SUPERFAMILY Mitochondrial carrier 32 333 IPR023395 -
Mtr5g0249 346 Pfam Mitochondrial carrier protein 33 119 IPR018108 -
Mtr5g0249 346 Pfam Mitochondrial carrier protein 136 226 IPR018108 -
Mtr5g0249 346 Pfam Mitochondrial carrier protein 237 338 IPR018108 -
Mtr5g0249 346 Gene3D Mitochondrial carrier domain 30 340 IPR023395 -
Mtr5g0249 346 MobiDBLite consensus disorder prediction 1 22 - -
Mtr5g0249 346 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 2 341 - -
Mtr5g0249 346 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Mtr5g0249 346 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Mtr5g0249 346 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Mtr5g0249 346 PRINTS Mitochondrial carrier protein signature 150 168 IPR002067 GO:0055085
Mtr5g0249 346 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Mtr5g0249 346 PRINTS Mitochondrial carrier protein signature 247 269 IPR002067 GO:0055085
Mtr5g0249 346 MobiDBLite consensus disorder prediction 1 18 - -
Mtr5g0249 346 PANTHER SOLUTE CARRIER FAMILY 25 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0249 Mtr-Chr5 2291487 2294980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0249 38 341 EF-hand Containing Proteins AT5G51050 39.672 2.09e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0249 K14684 - nnu:104600317 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0249 5 2291487 2294980 Mtr5g0249 5 2291487 2294980 ECH