Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0234 ATGAACAACAAAACCGTACTCGTTACCGGTGGTGCCGGTTACATTGGTAGCCACACCGTTCTTCAACTCTTACTCGGTGGTTTCAAGTCCATCGTCGTTGATAATCTTGATAATTCCTCAGAAGTTGCCATTCACAGAGTTAAGGAACTCGCCGGTGAATTTGGGAATAACCTCAGCTTTCACAAGGTAGATCTCCGGGACAGGGCCGCTCTAGAGCAAATTTTTGGTTCCACAACATTTGATGCAGTCATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGCGCAGAAACCGTTACTCTACTACAACAACAACTTGATTGGGACAATCACTCTATTGGAAGTCATGGCTGCTCATGGATGCAAGAAGCTTGTGTTCTCATCTTCGGCCACTGTATATGGTTGGCCAAAGGAGGTTCCATGTACAGAAGAGTTTCCTCTGTCAGCAGCAAACCCATACGGACGTACCAAGCTTACAATTGAAGAAATTTGTCGTGATGTTCATCGTGCTGAGCCAGACTGGAAAATAATATTATCGAGATATTTTAACCCAGTGGGTGCACACCCTAGTGGTTATATTGGAGAGGATCCTCGTGGAGTTCCAAACAATCTCATGCCATTCATTCAGCAAGTAGCGGTTGGCAGACGGCCTGCACTGACAATTTTTGGAAATGATTATAATACAGTTGATGGTACTGGGGTTCGGGATTTCATTCATGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTGCTTAAACTAGAGGAAGCTGATATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTCGGAGATTGTTAGAGCTTTTGAACATGCATCTGGGAAGAAAATTCCACTTGTGAAGGCTGGTCGTAGACCTGGTGATGCTGAAATTGTTTATGCATCCACAGAAAAAGCTGAAAGAGAACTTAAGTGGAAGGCAAAATATGGAATAGATGACATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTACGGCTATGGACCTCCGGATTCCACAGATTAA 1050 0.4381 MNNKTVLVTGGAGYIGSHTVLQLLLGGFKSIVVDNLDNSSEVAIHRVKELAGEFGNNLSFHKVDLRDRAALEQIFGSTTFDAVIHFAGLKAVGESAQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLTIEEICRDVHRAEPDWKIILSRYFNPVGAHPSGYIGEDPRGVPNNLMPFIQQVAVGRRPALTIFGNDYNTVDGTGVRDFIHVVDLADGHIAALLKLEEADIGCEVYNLGTGKGTSVSEIVRAFEHASGKKIPLVKAGRRPGDAEIVYASTEKAERELKWKAKYGIDDMCRDQWNWASKNPYGYGPPDSTD* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0234 349 Gene3D - 194 335 - -
Mtr5g0234 349 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Mtr5g0234 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 343 - -
Mtr5g0234 349 Gene3D - 6 275 - -
Mtr5g0234 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 343 - -
Mtr5g0234 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Mtr5g0234 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 342 IPR036291 -
Mtr5g0234 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0234 Mtr-Chr5 2139233 2143275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0234 5 319 Miscellaneous Gene Families AT4G00110 27.976 1.30e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0234 K01784 - gmx:100818509 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0234 5 2139233 2143275 Mtr5g0234 5 2139233 2143275 ECH