Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0233 ATGGAGAACCTAATATCATTGGTGAACAAAATCCAGAGAGCATGCACCGCTTTAGGTGACCACGGTGAAGCAGCCACTTCTTTACCCACTCTTTGGGACTCTCTCCCTTCTATCGCCGTCGTCGGTGGCCAGAGTTCTGGAAAATCCTCCGTACTAGAGAGCGTTGTTGGCAAAGATTTCTTACCTCGCGGATCAGGCATTGTTACACGGAGGCCTCTTGTTTTGCAGCTTCAAAAGATTGATGAAGGAAATAGAGAGTATGCAGAGTTTCTGCATCTTCCTAGAAAAAGATTCACTGATTTCGGTGATGTGAGGAAGGAGATTCAAGATGAAACCGATAGAGAGACTGGACGAACAAGACAGATTTCAACTGTTCCTATTCATCTCAGTATATATTCTCCCAATGTTGTTAACTTGACACTTATTGATCTTCCTGGCCTTACAAAGGTGGCTGTTGAGGGTCAACCAGATAGTATTGTCCAAGACATTGAGAATATGGTTCACTCTTACATTGAGAAGCCAAACTGTATAATTTTGGCAATTACACCAGCCAATCAAGATCTTGCTACATCCGATGCAATTAAAATCTCACGTGAAGTGGACCCCACCGGTGAAAGGACAATTGGAGTCTTGACAAAGATTGATCTTATGGATAAGGGTACCGATGCCGTTGAAATGCTGGAGGGGAGAGCTTATAGGTTAAAGTATCCCTGGATTGGTGTAGTCAATAGATCACAAGCAGATATTAACAAGAATGTTGATATGATTGCTGCTAGGCGTAGAGAACGCGAGTATTTTTCCAATACTCCTGAATATAAACACCTTGCTCACAGAATGGGTTCTGAGCACCTTGCCAAGATGCTTTCAAAGCATTTGGAGGCAGTAATCAAGTCCAAAATTCCCGGCATTCAATCACTTATCAGCAAAACAATTGCTGATCTTGAAACCGAACTGAGTCGTTTGGGAAAGCCTATTGCAGCTGATGAAGGGGGAAAATTGTATGCAATCATGGAAATATGCCGCACATTTGATCAAATATTTAAAGAACACCTTGATGGGGTGCGACCTGGTGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTCTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCGATGGAAAATATAAGGAAACTTATCACAGAAGCTGATGGATATCAACCTCATTTAATTGCGCCAGAACAAGGATACCGTCGCCTCATTGAATCTTCTCTAACTAGTATCAGGGGCCCTGCCGAGGCAGCTGTTGATGCGGTTCATTCCTTATTGAAGGACTTGGTTCACAAAGCAATCAGTCAGACTGTGGAACTGAAGCAATATCCAGGTCTGCGGGTTGAGGTCACAAATGCAGCTTCTGATTCGCTGGAACGAATGAGGGAGGAAAGCAAAAAATCAACTCTGCAGTTAGTTGATATGGAGTGTGGCTATCTGACGGTTGATTACTTTCGAAAACTTCCTCAAGATGTAGACAAGGGTGGCAATCCTACACATTCAATTTTTGATAGATATAATGATTCATATCTTAGGCGAATTGGATCGACAGTTTTGTCTTATGTCAATATGGTCTGTGCAAGTTTGAGGCATTCAATTCCGAAGTCAATTGTCCATTGTCAAGTGCGTGAAGCCAAGCGAAGCCTGCTTGATCATTTCTTCATTGAGATAGGAAAATATGAGTCCAAGCGTCTGTCATCATTGCTGAATGAGGATCCTGCAGTAATGGAAAGACGTACCGCCCTTGCAAAGAGACTAGAGTTATACAGGAGTGCTCAAGCTGAGATTGATTCCGCTGCTTGGTCTAAGTAG 1836 0.4265 MENLISLVNKIQRACTALGDHGEAATSLPTLWDSLPSIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLQKIDEGNREYAEFLHLPRKRFTDFGDVRKEIQDETDRETGRTRQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVHSYIEKPNCIILAITPANQDLATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVEMLEGRAYRLKYPWIGVVNRSQADINKNVDMIAARRREREYFSNTPEYKHLAHRMGSEHLAKMLSKHLEAVIKSKIPGIQSLISKTIADLETELSRLGKPIAADEGGKLYAIMEICRTFDQIFKEHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLTSIRGPAEAAVDAVHSLLKDLVHKAISQTVELKQYPGLRVEVTNAASDSLERMREESKKSTLQLVDMECGYLTVDYFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGSTVLSYVNMVCASLRHSIPKSIVHCQVREAKRSLLDHFFIEIGKYESKRLSSLLNEDPAVMERRTALAKRLELYRSAQAEIDSAAWSK* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0233 611 Gene3D - 1 310 IPR027417 -
Mtr5g0233 611 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 610 - -
Mtr5g0233 611 SMART GED_2 514 607 IPR003130 GO:0003924|GO:0005525
Mtr5g0233 611 PRINTS Dynamin signature 35 53 IPR022812 -
Mtr5g0233 611 PRINTS Dynamin signature 60 77 IPR022812 -
Mtr5g0233 611 PRINTS Dynamin signature 133 150 IPR022812 -
Mtr5g0233 611 PRINTS Dynamin signature 183 201 IPR022812 -
Mtr5g0233 611 PRINTS Dynamin signature 202 218 IPR022812 -
Mtr5g0233 611 PRINTS Dynamin signature 225 244 IPR022812 -
Mtr5g0233 611 Pfam Dynamin GTPase effector domain 515 606 IPR003130 GO:0003924|GO:0005525
Mtr5g0233 611 Pfam Dynamin family 38 214 IPR045063 -
Mtr5g0233 611 CDD DLP_1 34 301 IPR001401 GO:0003924|GO:0005525
Mtr5g0233 611 ProSiteProfiles GED domain profile. 519 611 IPR020850 -
Mtr5g0233 611 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Mtr5g0233 611 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Mtr5g0233 611 PANTHER DYNAMIN 2 610 IPR022812 -
Mtr5g0233 611 Gene3D Dynamin, middle domain 333 587 - -
Mtr5g0233 611 SMART dynamin_3 1 252 IPR001401 GO:0003924|GO:0005525
Mtr5g0233 611 Pfam Dynamin central region 222 489 IPR000375 -
Mtr5g0233 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0233 Mtr-Chr5 2131938 2137542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0233 - - gmx:100819043 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0233 5 2131938 2137542 Mtr8g3559 8 46170436 46178248 PCT