Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0228 ATGGAAAACGCGAGTGTTATAATACCAATATCTATTATTCTACTATCTTTCATCTTCTTATGCGGTCCCTCAACTGCACAACCACAACCACAACCCGCTATTCCTCCTTCTCCTTCTCCTCCACCTCTAGCTCCTGCATTGTTCGTCATCGGTGACTCCTCCGTTGATTCCGGTACCAACAATTTTCTTGCTACCTTTGCTCGCGCCGATCGTCTTCCTTATGGCAGAGACTTTGACACTCATCAACCCACTGGAAGATTCTCCAATGGTAGAATTCCCGTCGATTTTCTTGCTTCGCGTCTTGGACTTCCTTTTGTGCCAAGTTATCTTGGGCAGAGAGGGAATGTGGAGGATATGATTCATGGTGTCAATTATGCTTCTGCTGGTGCAGGAATTATTGTCTCAAGTGGCTCTGAATTGGGTCAGCATATCTCCTTAACTCAGCAGGTTCAACAATTTACTGACACATTTCAGCAGCTTATAATAAGCATGGGAGAGGATGCTGCAAAGACTCTCATATCCAATTCCATTGTTTATATCTCTATTGGAATCAATGACTACATTCATTACTATTTGCTCAATGCATCCAATGTTGATAATTTGTTCCTTCCATGGCACTTTAACCGGTTTTTAGCATCTTCACTCATGCGAGAAATAAAGAACTTGTACAACTTAAATGTTAGGAAAATGGTGGTCATGGGACTTGCCCCTATTGGTTGTGCCCCTCGCTATATGTGGGAGTACGGTATTCAGAATGGAGAATGTGTTGAACCGATAAATGACATGGCCATTGAGTTTAACTTTCTCATGAGATACATTGTTGAAAAGCTTGCTGAGGAGCTCCCTGATGCCAATATCATCTTCTGTGACGTGTATGAAGGTTCAATGGATATTTTAAAGAATCATGATCAATATGGCTTTAACGTCACGTCCGAGGCTTGCTGTGGATCCGGGAAGTACAAGGGTTGGTTGATGTGCTTATCGCCTGAAATGGCGTGCAGTAACGCATCCAACTATATCTGGTGGGACCAGTTCCATCCAACTGATACAGTGAATGGAATTTTGGCAGCCAATATATGGAATGGTGAGCACGCTAAAATGTGCTATCCTATGCACTTACAGGACATGGTAATTCAGAAGGCAAACTGA 1149 0.4282 MENASVIIPISIILLSFIFLCGPSTAQPQPQPAIPPSPSPPPLAPALFVIGDSSVDSGTNNFLATFARADRLPYGRDFDTHQPTGRFSNGRIPVDFLASRLGLPFVPSYLGQRGNVEDMIHGVNYASAGAGIIVSSGSELGQHISLTQQVQQFTDTFQQLIISMGEDAAKTLISNSIVYISIGINDYIHYYLLNASNVDNLFLPWHFNRFLASSLMREIKNLYNLNVRKMVVMGLAPIGCAPRYMWEYGIQNGECVEPINDMAIEFNFLMRYIVEKLAEELPDANIIFCDVYEGSMDILKNHDQYGFNVTSEACCGSGKYKGWLMCLSPEMACSNASNYIWWDQFHPTDTVNGILAANIWNGEHAKMCYPMHLQDMVIQKAN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0228 382 CDD SGNH_plant_lipase_like 48 362 IPR035669 -
Mtr5g0228 382 Gene3D SGNH hydrolase 41 365 IPR036514 -
Mtr5g0228 382 Pfam GDSL-like Lipase/Acylhydrolase 47 357 IPR001087 GO:0016788
Mtr5g0228 382 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 36 378 - -
Mtr5g0228 382 PANTHER OS02G0290900 PROTEIN 36 378 - -
Mtr5g0228 382 SUPERFAMILY SGNH hydrolase 46 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0228 Mtr-Chr5 2105119 2107776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0228 24 377 Acyl Lipid Metabolism Gene Families AT4G10950 67.857 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0228 - - pvu:PHAVU_002G165200g 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0228 5 2105119 2107776 Mtr5g0228 5 2105119 2107776 ECH