Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4703 ATGCCACCGGCTCTGTTGGATCCACCATTGTCAAAAACATCGTCGGTTTCATCTTTAATCTCCGGCACCATTTCTCAGGAACCGGTGCCGGAGAATCGGTTATTCGATGATCTTAGAGGTTTGCAGTGGCGTATAAATCTTGGGGTTTTGCCATCTTCTTCATCTTCAACTTCCGTTGATGATCTTCGTCGTGCCACTGCTAATTCTCGAAGAAGGTATGCTAGTTTGAGAGGGCGGCTCCTGGTTGATCCCCACGTTCCAAAGGATGAAAGTAGTTCACCCAATCTTGTCATGGACAACCCGCTTTCACAAAATCCAAATAGTACATGGGGTCGCTTTTTTCACAATGCAGAGCTGGAGAGGATGGTGGATCAGGATTTATCACGTTTATACCCAGAACATGGCAACTATTTCCAGACTAAAGGGTGCCAAGGCATATTGAGACGGATTTTATTATTATGGTGTCTTAGACATCCCGATTGTGGTTATAGACAAGGTATGCACGAGTTGCTTGCTCCTTTGCTTTATGTTCTCCAAGTTGATGTGGAGCGCCTTGCAGAAGTTCGAAAACTTTATGAAGATCATTTTACAGACAGATTTGATGGTCTCTTTTGTCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTTCAGACTTGACGGATGACGAAATCGGTTCTCACGGAAAAGGAATGAAAATCAAGAGTCTTGATGAGCTTGATCCTAAGATACAGACCATTGTATTGCTAAGTGACGCTTATGGGGTTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTTATTGAGCATGATGCTTACTGTATGTTTGAAGCTTTAATGAATGGGGCTCACGGTTCAGTTGCAATGGCTGATTTTTTCTCTTATTCTCCTGTTGCTGGGTCCCATACTGGTTTGCCACCTGTAATTGAAGCTTCTGCTGCATTGTATCATTTATTGTCGCATGTGGATTCATCTTTGTATAGCCATCTTGTTGATCTCGGGGTTGAACCACAGTACTTTGCTCTCCGCTGGTTGAGAGTTTTATTTGGACGAGAATTTTCACTTGACAACCTCTTGATCGTCTGGGATGAAATATTTTTATCAGATAATAGTAAAATGGAAAAGCATGCAGAGGACAACACAGACACTTGTTTTAGGATCTTTCATTCATCTCGCGGAGCATTTATCTCAGCTATTGCTGTGGCAATGTTACTTCATATAAGATCTTCACTACTTGCAACTGAAAATCCTACGACATGTCTCCAGAGATTATTAAGCTTCCCTGAGAACACAAACATTAAAAAACTAATAGAGAAAGCTAAATCCTTGCAGACTCTTGCATTAAGTACTGAAATTTCATCCTCGACACCTGCACTTGTAGAATATAACAACAAGGGTAAATCAGTTATTACAAGATCTGTTACCACCATTGCATGTGAATCAGGTTCACCAAAAACTCCTAAGAGTTTATTACCTGATAATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCACAGTGCTGAAGAACTTAAACAAGATGGAGTAGAAAAGCAGGTTCCATCTCAGAAAAAGAGATGGACAGAAAAGGTAAAGTTAAGTTTAAAAAGAACAGTATCTGAACCATCTTCGTCAACAATCAAGAATGGTAAAAAGGAATCTAAGACATCTGTTAAGCGCAGTTTGTTAGAAGATCTATCCAAGGAACTTGGGTCAGAAGAAGATATAGAAAATCTCGGCTGTCATGAAACCTTATGCCAGCAGGATAATCATTCTTTAGCAGTTGAGGCGGAGCAACAAGATGATGACTCTGACGTAAGCAACAATTACGGTGCTGATGATAGATGTCTTAGCAGAAACACCGGCAGCGAGGAAAACTCATTCAACCTAGCTAGTCCTCCTAATGAGTTCAAAGATCATGAAAATGTCTCACAGAAAAGTAGTGTTGGGTCTAATTTATCCCTTGATGTAATTAATGAAATTTCATATAGCAGTCCCATCGATTCACCTCTTCCAATTTCTGATCATCCTGAGAACAACCTATCTCCGGTGGCAGGGCGCAATAATGATTCCACAGGAAATTCCGCCACACTTTCTAGGAATATAAAACTGAATAAATTCCAATGGCTTTGGAAGTTTGGCCGTAATAATGGTGAGTTGATGTCTGAGAAAAGAGGACTTGCTTCTGAGGCTGTAAAACAAACCAACAAGTATAACGATCAAAGTAATACAGCTTCCTCTTCTACAGCTGGTGATCTTTGCAGTTCTGTTAATTTTAATGGAGATTCTGCTGACCAGAATGTCATGGGAACTTTAAAGAATATTGGGCAGTCCATGCTTGAGCATATTCAGGTGATTGAGTATGCTTTCCAACAAGAGTGTGGTCAGGGAACTTCATTGGATAATAATACGTCTAAAAATGTTCTGGTTGGCAAAGGGCAGGTTACTGCCATGTCAGCTCTCAAGGAGCTTCGCAAAATTAGCAACCTTTTGTCTGAGATGTGA 2511 0.4042 MPPALLDPPLSKTSSVSSLISGTISQEPVPENRLFDDLRGLQWRINLGVLPSSSSSTSVDDLRRATANSRRRYASLRGRLLVDPHVPKDESSSPNLVMDNPLSQNPNSTWGRFFHNAELERMVDQDLSRLYPEHGNYFQTKGCQGILRRILLLWCLRHPDCGYRQGMHELLAPLLYVLQVDVERLAEVRKLYEDHFTDRFDGLFCQENDLSYSFDFKKSSDLTDDEIGSHGKGMKIKSLDELDPKIQTIVLLSDAYGVEGELGIVLSEKFIEHDAYCMFEALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSLYSHLVDLGVEPQYFALRWLRVLFGREFSLDNLLIVWDEIFLSDNSKMEKHAEDNTDTCFRIFHSSRGAFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPENTNIKKLIEKAKSLQTLALSTEISSSTPALVEYNNKGKSVITRSVTTIACESGSPKTPKSLLPDNSYWEEKWRVVHSAEELKQDGVEKQVPSQKKRWTEKVKLSLKRTVSEPSSSTIKNGKKESKTSVKRSLLEDLSKELGSEEDIENLGCHETLCQQDNHSLAVEAEQQDDDSDVSNNYGADDRCLSRNTGSEENSFNLASPPNEFKDHENVSQKSSVGSNLSLDVINEISYSSPIDSPLPISDHPENNLSPVAGRNNDSTGNSATLSRNIKLNKFQWLWKFGRNNGELMSEKRGLASEAVKQTNKYNDQSNTASSSTAGDLCSSVNFNGDSADQNVMGTLKNIGQSMLEHIQVIEYAFQQECGQGTSLDNNTSKNVLVGKGQVTAMSALKELRKISNLLSEM* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4703 836 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 764 - -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 540 562 - -
Mtr4g4703 836 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 764 - -
Mtr4g4703 836 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 307 447 IPR035969 -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 613 635 - -
Mtr4g4703 836 Gene3D - 311 455 - -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 1 24 - -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 671 698 - -
Mtr4g4703 836 Pfam Rab-GTPase-TBC domain 120 180 IPR000195 -
Mtr4g4703 836 Pfam Rab-GTPase-TBC domain 272 373 IPR000195 -
Mtr4g4703 836 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 107 289 - -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 683 698 - -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 598 651 - -
Mtr4g4703 836 ProSiteProfiles TBC/rab GAP domain profile. 33 372 IPR000195 -
Mtr4g4703 836 SMART tbc_4 25 418 IPR000195 -
Mtr4g4703 836 MobiDBLite consensus disorder prediction 10 24 - -
Mtr4g4703 836 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 36 332 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4703 Mtr-Chr4 61046930 61052276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4703 K18469 - gmx:100816501 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4703 4 61046930 61052276 Mtr4g4703 4 61046930 61052276 ECH
Mtr4g4703 4 61046930 61052276 Mtr2g1499 2 16580691 16585685 PCT