Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4702 ATGGGAACGTTCCAAACATGGAGAAAGGCCTACGGAGCTCTTAAAGATTCCACCAAGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGAATTGGACATTGCAATTGTAAAAGCTACAAGTCACTTAGAATATCCACCTAAGGAACGTCATGTTCGAAAAATATTCTATGCTACATCAGCTCACCAACCAAGGACAGATGTATCTTACTGCTTACAGACCCTTTCCAAGAGACTTTTAAAGACTCGAAATTGGATAGTTGCCATAAAGACATTGATTGTGGTCCATAGGATATTGAGAGAGGGTGATCTTAGCTTCAAAGAAGATCTTGTAAACTACTCACACAGAGTACGGTTTCTCCGAATTTCCAACTTCAAAGATGACTCAAGCCCTCTAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACAATTTTTAGAAGAAAGACTTGAATGTTTTAGAATTTTTAAATATGACATCGAGTTCGAGCGTTCAACAAAATTATCATCGCCGGCTTCAACTAAAACACATAGCAGAACAACAGTGTTGACTAGTGATGAGCTGTTGGAGCAGTTACCGGCGCTGCAGCAACTTCTTTACCGACTTGTTTGCTGTCAACCTGAAGGAGCAGCTTTCAACAATTATCTAATACAGTATGCATTAGCGTTGATTTTGAAAGAGAGTTACAAAATATATAGTTCCCTCAATGATGGAATCATAAAACTTGGGGATGTGTTCTTTGATATGGCGAAACACGACGCTATAAATGCTTTGCATATATATAAAAGAGCTGGCCAACAGGCTGAATGTCTTGCTGATTTCTATGAATATTGCAAGGGCTTAGACCTTGCAAGAAATTTTCAATTTCCAGTTTTGAGACAGCCACCGCCTTCTTTTGTTGCCACAATGGAAGAATACATTAAAGAATTAGCACCTACATCAGGCAGTGTTAAGAGCTTGGATCAAGAAAATGAAGAACCACCGAAAGAAGAACCAGAAGAAAAAGAAACTGAAGAGCCTGAAGTAATTGAGGAACAAGCTGAAGAAATCAAGGAGGAAGAACCTGTTGAAAAGGAACAAACAGAGGAGGCTGAATTTCCTCCTTTGATATTGACTGATGGTTATGATGATTTTCTGGGTCTAAATGAAATAAATCCAAAAGCTCAAGAACTAGAGGATAGCAATGCTTTGGCACTTGCAATCATACCACCTGATGGAAACAATTCAAACAATCTTGCTTTGACTAATATAACTGGAACTACTGGTTGGGAACTTGCACTTGTTACCACGCCAAGCAACCACACCTGCCAAGCGTCAGATCAAAACATGGCTGGTGGATTTGACAAGCTATTGCTAAACAGTTTGTATGAAGATGAAAATGCAAGGAGACAACTTCAACTCCAAAATGCAGGTTATGGATATGGGGGGGCGGCTACACATAATCCGTTCAATAGTTATAATCAGCATGATCCATTTGCAGTATCGAATAATGTAGCGCTTCCATCTAACGTACAAATAGAATTAATGTCTCAACAACAAATGATGTTCCAGCAACAGCAAATGATGTTCCAACAACACAACACAATGATGGTACCTTACCAGCAGCAGCAGCCATATACTCATTACCCTCAACAGAAGTCCGTTATGCGTTCTTCTAATCCATTTGTAGATCCTTTACCTGTACCTAGCTATTCTTATGGTTCCATGCCCCACCAAGGGAGCTACAATATAATGTAG 1740 0.3994 MGTFQTWRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATSHLEYPPKERHVRKIFYATSAHQPRTDVSYCLQTLSKRLLKTRNWIVAIKTLIVVHRILREGDLSFKEDLVNYSHRVRFLRISNFKDDSSPLAWDCSAWVRTYAQFLEERLECFRIFKYDIEFERSTKLSSPASTKTHSRTTVLTSDELLEQLPALQQLLYRLVCCQPEGAAFNNYLIQYALALILKESYKIYSSLNDGIIKLGDVFFDMAKHDAINALHIYKRAGQQAECLADFYEYCKGLDLARNFQFPVLRQPPPSFVATMEEYIKELAPTSGSVKSLDQENEEPPKEEPEEKETEEPEVIEEQAEEIKEEEPVEKEQTEEAEFPPLILTDGYDDFLGLNEINPKAQELEDSNALALAIIPPDGNNSNNLALTNITGTTGWELALVTTPSNHTCQASDQNMAGGFDKLLLNSLYEDENARRQLQLQNAGYGYGGAATHNPFNSYNQHDPFAVSNNVALPSNVQIELMSQQQMMFQQQQMMFQQHNTMMVPYQQQQPYTHYPQQKSVMRSSNPFVDPLPVPSYSYGSMPHQGSYNIM* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4702 579 SUPERFAMILY GAT-like domain 180 310 - -
Mtr4g4702 579 Pfam ANTH domain 31 310 IPR011417 GO:0005543
Mtr4g4702 579 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Mtr4g4702 579 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Mtr4g4702 579 Gene3D - 7 161 IPR008942 -
Mtr4g4702 579 SMART enth_2 30 161 IPR013809 -
Mtr4g4702 579 MobiDBLite consensus disorder prediction 313 364 - -
Mtr4g4702 579 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 566 - -
Mtr4g4702 579 Gene3D ANTH domain 174 325 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Mtr4g4702 579 CDD ANTH_N 32 154 - -
Mtr4g4702 579 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 566 IPR045192 GO:0048268|GO:0072583
Mtr4g4702 579 MobiDBLite consensus disorder prediction 327 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4702 Mtr-Chr4 61041967 61046048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4702 K20044 - gmx:100815975 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4702 4 61041967 61046048 Mtr4g4702 4 61041967 61046048 ECH
Mtr4g4702 4 61041967 61046048 Mtr2g1502 2 16610144 16614400 PCT