Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4630 ATGTTGCGCAAAGTTAAAGGTGATGGTGAAGAATATTTGTTAAAAGATGTTGAAATTATAAGAAAAAATCTATACCTGGAAAAAAGCTTTTCTGTGAATTCAACATCATCATCAAAATCCAAGAACTATGATCCAAAACCTGAAAAAGAAGGTAATAATTTGAAAAAGGATAAAAAATCCAAATGGAATTGGAAGAAGCCATTGAGGGCACTTTCCCTTTCAAAGAATAAGAAATTCAAATTTTGTTTTTCTCTTCAAGTTCATCTCATTGAAGGGTTACCTTTGAGTTTCAATGATTCTACCCTTTGTGTACATTGGAAACTGCGTGATGAACATTTGGTTACCCCTCCGGCCAAAGTGATTCAAGGGGTTGCTAAGTTTCAAGATATTTTGAATTGTACTTGTTCAATTGTTGGAACTAAAAGTGGATCACATAATTCTGCAAAGTATGAGGCTAAGCATTTTTCGCTTTATGCTTCTGTGCTTGGTGTTCCTGAACTTGATTTAGGGAATCACCGTTTGGATATTACACGGTTGCTTCCGCTTTCGTTGGATGATCTTGAAGAGGAGAAGAATTCGGGGAAATGGAGTACGATTTTTAGATTATCAGGAAAGGCTAAAGGGGCTGTAATGAATGTGAGTTTTGGGTATATGGTGGTTGGTGATAACAATACTTTTGCGCCTAATGTGTTGACTTCAAGGCAAAATTGTTTGGCATTGAGTGAAACGGATGTAAATCCGTGTCAGTATTCATCTCGGGTTATAGATGAGGTGAAGGATCTTCATGAGGTACTGACATCAACAAAATCTGCAGTGCCTAGTTCAACAGATGTGTTGAATAAGAAATCTGATGATGAAAACACATGTAGTCCCCCACACAAGAAAGATGAACTTGTGCTAAAAGAGAGTCTGGAGCCGATCAAATTTGATGTATTTCAAGAAAACTTGGAGACAGTTGAGCCAAATGTTTTTTTTACACCCGTGTCTGTAAAAGAGAATTATGATGAATGTGAATGTGTTGAATTTGCTGCTGTTGATCAGGGTGTTGAATTTTCATCAAATGAACATGTTAAACTGGAGGAATCCATTGTAGAAGCTAATGTTGACAGTTCTAAGGAAAGCATTGCGGTACATGAAGTTTCTAACAATAAGGATGATTTATATACCAAAGAGCTTCTCCTGCAAGAAATAGAATCAGTTTTAAATAGTGTCTCAGAGTTGGAGATACTGGCAATGGAATCTCCTATAATTATGGAAGTCGCATCTGAAAGTATGTTTAGAAAGTCACAAAGCATGGATGATTTCACCGAATCAGTTACCAGTGAATTCTTGAGTGTGCTAGGTTTAGACGATAGTCCAATAGGCTTTAGTTCTGAAAGTGAGCCTGAGTCTCCGAGAGAGCGCCTTTTAAGACAATTTGAGAAGGAAATGGATTCTGAGGGCTTCTCTTTATTTGATACTGACACATGTTATGTTGGTGAAGAAGAAGAAGATTGTGATTATGGTGCTTCTTTTGGACCTGAGCAGTGGAAGTTCTCTACAGGTATTAAGCCACCATCGTTGTCGCATGATCTGCAGGAAGGGCTTGAATTTGAGGATGAGGATGTGAAGAGCAAACCAAAGGGTCATATACTAGAAGACTCGGAAACAGAAGCCTTAATGCACGAATGGGGTTTGAATGAGGAGGCTTTTCAGTATTCTCCAACAAAAGGCTTTGTTGGTTTTGGAAGTCCAATACATGAACTACCTGAAGAGCCTCCTAGATTACCTCCTCTGGCAGAAGGGTTTGGTCCTTTCATCCAAACAAAAGATGGGGGATTTCTAAGGTCTATGAATCCCTCACTTTTTATGAATGCTAAAAGTGGTGGAAACTTAATCATGCAGGTTTCCAACCCCGTTGTTATGCCTGCAGATATGGGTTCAGGGTTAATGGAGACTTTGCAATATTTGGCATCAGTCGGAGTTGAAAAGCTTACAATGCAGGCAAACAAGTTTATGCCTCTGGAAGATATCACAGGGAAGACAATGCATCAAATATTATGGGAAGCTATGCCAAGCTTAGAGGGAAAAAACAGGCAATGCCATTTGCAGCATGATTTGGTGACACGGAAAGGCTCTACTTGCGTGCAAAGGGGCTTGAAAGGATCATCATCCGAACTGAAGTCTGATGAATTTACTTCAAGTTCAATTGGCAACCAGGGAGGTTCGAGTTTTTGTTCATTGGAAGATCTTGCTCCTTTGGCTATGGATAAAATTGAAGCACTTTCAGTGGAGGGTTTAAAAATTCAATCTGGGATGTCGGAGGAAGATGTGCCGTCAGACATCATTGGACAATCCTTCAGAGATCTTTCTGGTCTCCAAGCCAAGGGGGTTAACATTGGAGGTTCTCTTGGCCTAGATGGAGCTGCTGCTCTGCCGTTGTTGGATATCAAAGATAGTAGCGATGAAGTTGATGAGATAATGGGATTATCATTAACTCTTGATGATTGGATGAGACTGGATTCAGGTGAAATTGATGATATAGATGATATCAGTGAGCATACTTGCAAACTTCTTGCTGCCCATCATGCCAACTCTTTCGACGTAATCCGTGAGAGTTCAAAGGGAAGGAAGAAACAAGGTAAAAGTCATGGCAGGAAATGTGGTTTGCTGGGAAATAATTTCACAGTGGCGTTAATGGTGCAACTTCGTGATCCTCTGAGAAATTATGAGCCTGTTGGAACACGAATGCTATCTCTTATACAAGTCGAGAGAGTGTTAGTCCCGCCAAAGCAAAAGATTTGCTCGAATGTATCTCAGGTAGGGAACAATAGTGATGAGGATGATGAGTGTGAAATACAAGAAAAGGTAGAGATGAAAGACAACAAAGAGGAGAGAAGTGGTAAAGAAAGTGACATTGCTCAATTCAGAATTACAGAAGTTCATGTTGCAGGTCTTAAGATTAAGTCACACAAAAAGAAGCTTTGGGGTGCATCAAGTAAGCAACAGTCTGGTTCTCGTTGGTTGATTGCTAATGGAATGAGCAAGAGCAATACGAATCCATTGATGAAGTCTAAGGTTGCTTCTAAATTTGGTGAAGTCACCACCACAAAGGTACAACCTAGAGATACATTGTGGAGCATGTCATCTCGTATTTATGGCACTGTTACAAAATGGAAGGAATTGGGAGCACTAAATCCTCATATAAGAAATCCCGATATCATTATACCAAATGAAACTATAAGAATACGTTGA 3234 0.3952 MLRKVKGDGEEYLLKDVEIIRKNLYLEKSFSVNSTSSSKSKNYDPKPEKEGNNLKKDKKSKWNWKKPLRALSLSKNKKFKFCFSLQVHLIEGLPLSFNDSTLCVHWKLRDEHLVTPPAKVIQGVAKFQDILNCTCSIVGTKSGSHNSAKYEAKHFSLYASVLGVPELDLGNHRLDITRLLPLSLDDLEEEKNSGKWSTIFRLSGKAKGAVMNVSFGYMVVGDNNTFAPNVLTSRQNCLALSETDVNPCQYSSRVIDEVKDLHEVLTSTKSAVPSSTDVLNKKSDDENTCSPPHKKDELVLKESLEPIKFDVFQENLETVEPNVFFTPVSVKENYDECECVEFAAVDQGVEFSSNEHVKLEESIVEANVDSSKESIAVHEVSNNKDDLYTKELLLQEIESVLNSVSELEILAMESPIIMEVASESMFRKSQSMDDFTESVTSEFLSVLGLDDSPIGFSSESEPESPRERLLRQFEKEMDSEGFSLFDTDTCYVGEEEEDCDYGASFGPEQWKFSTGIKPPSLSHDLQEGLEFEDEDVKSKPKGHILEDSETEALMHEWGLNEEAFQYSPTKGFVGFGSPIHELPEEPPRLPPLAEGFGPFIQTKDGGFLRSMNPSLFMNAKSGGNLIMQVSNPVVMPADMGSGLMETLQYLASVGVEKLTMQANKFMPLEDITGKTMHQILWEAMPSLEGKNRQCHLQHDLVTRKGSTCVQRGLKGSSSELKSDEFTSSSIGNQGGSSFCSLEDLAPLAMDKIEALSVEGLKIQSGMSEEDVPSDIIGQSFRDLSGLQAKGVNIGGSLGLDGAAALPLLDIKDSSDEVDEIMGLSLTLDDWMRLDSGEIDDIDDISEHTCKLLAAHHANSFDVIRESSKGRKKQGKSHGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTRMLSLIQVERVLVPPKQKICSNVSQVGNNSDEDDECEIQEKVEMKDNKEERSGKESDIAQFRITEVHVAGLKIKSHKKKLWGASSKQQSGSRWLIANGMSKSNTNPLMKSKVASKFGEVTTTKVQPRDTLWSMSSRIYGTVTKWKELGALNPHIRNPDIIIPNETIRIR* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4630 1077 ProSiteProfiles LysM domain profile. 1028 1076 IPR018392 -
Mtr4g4630 1077 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 7 1076 - -
Mtr4g4630 1077 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 75 220 IPR019448 -
Mtr4g4630 1077 SMART LysM_2 1029 1077 IPR018392 -
Mtr4g4630 1077 MobiDBLite consensus disorder prediction 42 58 - -
Mtr4g4630 1077 Pfam LysM domain 1031 1076 IPR018392 -
Mtr4g4630 1077 Gene3D LysM domain 1022 1077 IPR036779 -
Mtr4g4630 1077 CDD LysM 1031 1076 IPR018392 -
Mtr4g4630 1077 ProSiteProfiles C2 NT-type domain profile. 71 219 IPR019448 -
Mtr4g4630 1077 MobiDBLite consensus disorder prediction 31 59 - -
Mtr4g4630 1077 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 7 1076 IPR039614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4630 Mtr-Chr4 60268327 60272306 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4630 - - lja:Lj4g3v2179220.1 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4630 4 60268327 60272306 Mtr4g4630 4 60268327 60272306 ECH
Mtr4g4630 4 60268327 60272306 Mtr2g1600 2 17993231 17998304 PCT