Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4623 ATGTTGTGTCTGAGAACGCAGCTTTCATTTTCACTTCGCATACCTTCTTCCTCGTCATCTTCAAAACACCTCACACCACATCTTCTCTCATTTCCATCAAGATCTTCTTCTTCAATCAAAACCATGTCAACAACTCATTCCAAATCCCAAACCATAGAACACATCGTTCTCTTCAAAGTCAAACAAGACACCGAACCCTCCAAAATTACCTCCATGATTAACAATCTCAGCTCTCTCGTATCCCTCGATCAAGTCCTCCATCTTACCGTAGGCCCTCTCCTACGCAATCGTTCCACTTCATTAACCTTCACTCACATGCTTCACACTCGTTACAGCTCCAAACAAGATCTCGAAGCTTATTCCGCTCACCCTAGCCACGTCAGCGTCGTTAAGGGAAACGTGCTTCCTATCATTGATGATATCATGGCCGTTGATTGGATCGCTGAGGATCTTAACGGTGAGGATTTGGTTCCGAAGGAGGGTTCTGCGATGAGAGTTATGTTCTTGAAATTGAAGGAGAATGTTGTTAATGATAAGGTTTTACAGGTTATTAAAGAAATTCCAGAAAATTTTCAACAGATTAAGCAAATTTCCTATGGTGAGAATTTCTCTCCGGCGAGAGCTAAGGGATATTCGATTGCTTCGTTAGCGGTTTTTCCAGGAGAGAAGGAGATGGAGGAACATGATTCCAATCATGAGTTGATGAAATTTCAGAAGGATAAGGTTAGGGATCAGATTGAGAGTGTTGTTGTCGTTGATTATGTGGTGCCGCCGCCACCACCTCCTCAATCGGCAAGTCTTTGA 804 0.4303 MLCLRTQLSFSLRIPSSSSSSKHLTPHLLSFPSRSSSSIKTMSTTHSKSQTIEHIVLFKVKQDTEPSKITSMINNLSSLVSLDQVLHLTVGPLLRNRSTSLTFTHMLHTRYSSKQDLEAYSAHPSHVSVVKGNVLPIIDDIMAVDWIAEDLNGEDLVPKEGSAMRVMFLKLKENVVNDKVLQVIKEIPENFQQIKQISYGENFSPARAKGYSIASLAVFPGEKEMEEHDSNHELMKFQKDKVRDQIESVVVVDYVVPPPPPPQSASL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4623 267 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 34 265 - -
Mtr4g4623 267 Pfam Stress responsive A/B Barrel Domain 165 256 IPR013097 -
Mtr4g4623 267 Pfam Stress responsive A/B Barrel Domain 52 147 IPR013097 -
Mtr4g4623 267 ProSiteProfiles Stress-response A/B barrel domain profile. 52 146 IPR013097 -
Mtr4g4623 267 SMART Dabb_2 52 148 IPR013097 -
Mtr4g4623 267 SMART Dabb_2 165 256 IPR013097 -
Mtr4g4623 267 SUPERFAMILY Dimeric alpha+beta barrel 50 151 IPR011008 -
Mtr4g4623 267 ProSiteProfiles Stress-response A/B barrel domain profile. 163 254 IPR013097 -
Mtr4g4623 267 Gene3D - 162 258 - -
Mtr4g4623 267 PANTHER - 34 265 IPR044662 -
Mtr4g4623 267 Gene3D - 43 150 - -
Mtr4g4623 267 SUPERFAMILY Dimeric alpha+beta barrel 163 259 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4623 Mtr-Chr4 60213696 60214783 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4623 - - mtr:MTR_4g125530 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4623 4 60213696 60214783 Mtr4g4623 4 60213696 60214783 ECH
Mtr4g4623 4 60213696 60214783 Mtr2g1618 2 18204478 18205143 PCT