Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4616 ATGACAAAAGAAGAAGAAGAAGAAGATATAGCTAGAGCTGTTGTTGCTTCTATACATTCATCAAAAGATGATAACAACAATGGTATTAGTCAACTTCAAAGGTTTCAGTATCAAGTTACTGAATTGTTCAAGGGATTTTCAAGTGTTCAAAATGAAAATACTAATTACAATCCTGAAATCCTCACTACTCTCAAGCGTCAATGGGCTGCAAATTTTCACTTGAAGTACATGGGCCATAGGTCGTTGAAGGAGCCCTCGCGGCTGTTCGAAAGCATGGTGGTTGTTGGACTTCACCCTAATTGTGATGTTCAGGAACTGCATAGGCAATTTGTTGATAGGAAATCTGATGGATCTGGTAAATTGAGAAGTTCACTTGGTTGTGAGAATCAATCTCGTGTAGAACCCAATATTGAACCTCAGGTCTTGTTTGTTTATCCTCCAGAAAAACGACTGCCTCTTAAATGCAAGGATCTTCTTTCTTTCTGTTTCCCTGGAGGCTTGGAGGTTCGAGCTATTGAGAGAACCCCCTCCTTGAGTGAATTGAATGAAATTTTTTTTGGGCAGGAACACCTTAAACAAATGGATCTGTCATTTGTATTCAGGTTACAGGGTGCCGACAATTCAACACTTTATGGGTGTTGTGTTTTGGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGCTGTCTCTTATTTCTGACAAGCAACCATCTCACTCTTCTTTAAGACGTTGTATATTAACTACTCAGAGATGTTACTGCATTCTTTCAAGGCTTCCATTTTTTGAACTGCACTTTGGTGTATTAAATAGCATCTTCACTCAAGAAAGGTTAGAGAAGCTGACGAAGAGCGTTGAAGATTCAAATTTAGAATTTGTTGAAGGTAGATATGATGAAGAAAATTCGGAGGGAAATTCAGAGAGTGTGTTGGTGAGCGATGGAATAATAGAGCACAGATTTCATGAAAATTCATTAATTTCTCAATTAAGAGTAAGAACATCGACATCTGAAAACATTGTTGATGATGGCCCCCCTGAGAACCTAATAGTTGATGGAGAGCCACGGTCATATAAGGAGATAATCGATTATGACAGTGTTGTGCCTATCGAGTATGAAACTGACAGGTCAACGGCCAAAGAAGAATCTGGCCCTATAATTTCTGAAGATAGTGATGGTCACCCGGAGAACCTAATGGTTGATGGAGAACTTCAGTCTTATAAGGACGGAATATATTATGACAATGTTGTGCTCACTGAGCATGAAACTGATAGCGTAGAAGCCAAAGAACCTGGCCCTACAGTTTCTGAAGATGGTGATGGTCACCAGGTGAACCTAATGGTTGATGGAGACCTGCAGTCTCATAAGGCGAGAACAGTTAACGGCATTGTTGTTCCTACCGAGCATGAAACGTATACCGAAGCAGCCAAAGAAGAATCTGGCCCTACAATTTCTGAAGATAGTGATAGTCACCTGGAGAACCAAATGGTAGATGGAGAGATACAGTCTTATAAGGAGAGAGTAGACTATGACAGTGTTATGCCTACTGAGCATGAAACTGATAGGGCAGAAGCCAAAGAAGAACCTTGCTGTACAATTTCTGAAGATAGTGATGGTCACCCGGAGAACCAAATGGTTGACAGGGAGCTGCATCCTTATAAGGAGAGAATAGATTATGACAATGTTGTGCCTACTGAGAATGAAACTGATAGGACAGAAGACAAAGAAGAATCTTTCCCTAGAATCTCTGAAGATAGTGGTGGTCATCTGGAGAACGCAATGGTTGATAGAGAGTTGGAGCCTTACAAGGAGAAAATCGATCATGACAGTGTTGTGCTTACCGAGCATGAAATTGATAGGACAACAGCAAAAGAAGAATCTGGCCCTACAATTTCTGAAGACAGTGATCAGTATGGAGATGCTTTTGCCACCAATAAAGAATTAGAAGATCGGAATTTACCCAATGCTATTTTGCCTCTCCTGCGTTATTGCCAGTATGAAAGCTCTAAATCGTCCTGCAGTTTTCAAGCCTCACCTTGTGAAGACAAAAATTTCAGGAGTGACATTGATGATAATGAGACAGAAGATGCATCTTTTTCTGGCCAAGAGAATTTAAATGACTTAAATGATATTCTTGAATGGGCCATGGAAAATGACCACGGACCACTACAAATTATATGCGAGTATTACCGGATTGGTTGTCCTTCCAGGGGTTCATCACTTACATTTCATTCTTTGGAGCACCTGCATCCGTTGGAGTATCATAGACCAGCCGAGACAGTCCTGTGTCGTACTGGTTCAACAGTTGATTTGAAAAGTTGCAGTACCGGTCAGGAGTTGGCTGATGCACAGAACACTCTTGCGATGGAAGAGGCAACTTCGTTATCTGTATGGACTACTGCTTGCTTATGTGGTACCTTGAGACTCGAAAATGTGTTAACATTCTTAGCAGGAATTGTGCTGGAGAAGCAGATAGTTGTTGCCTGCTCTAATTTGGGAATCCTTTGTGCTTCAGTTTTATCAGTTATTCCGCTAATCCAGCCTTATCGATGGCAAAGCCTGCTAATGACAGTTTTACCGAATGACATGCTTGAGTTTTTAGATGCACCTGTCCCTTATATAGTTGGTATCAAGAACATGACCAGTGAAGTCCAGTCAAAGTTTACCAATGTTATTGTGGTTGATGCCAACAGAAACCAGGTGACATCACCAACAATACCACAACTTCCAAGACAGAAAGAGCTAATATCTTCTTTACGCCCTTATCACGCAGCTCTTGTAGGTGAAAGTTACTTGGGAAGGAGAAGGCCAGTGTATGAATGCACAGAAGTGCAGATTGGAGCTGCAAAGGGGTTTCTTTCGGTGTTGAGGTCTTATCTGGATTCTCTTTGCTATAACATCCGTTCTCACACAATTACCAATGTACAATCAAATGACGATAAGGTATCTTTGCTTTTGAAGGAGAGTTTCATCGGCTCATTCCCGTATCGCGATCGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTACACACAGACATCGTCCTCTCTTCTGTACAAAAGGAATAG 3072 0.4118 MTKEEEEEDIARAVVASIHSSKDDNNNGISQLQRFQYQVTELFKGFSSVQNENTNYNPEILTTLKRQWAANFHLKYMGHRSLKEPSRLFESMVVVGLHPNCDVQELHRQFVDRKSDGSGKLRSSLGCENQSRVEPNIEPQVLFVYPPEKRLPLKCKDLLSFCFPGGLEVRAIERTPSLSELNEIFFGQEHLKQMDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLISDKQPSHSSLRRCILTTQRCYCILSRLPFFELHFGVLNSIFTQERLEKLTKSVEDSNLEFVEGRYDEENSEGNSESVLVSDGIIEHRFHENSLISQLRVRTSTSENIVDDGPPENLIVDGEPRSYKEIIDYDSVVPIEYETDRSTAKEESGPIISEDSDGHPENLMVDGELQSYKDGIYYDNVVLTEHETDSVEAKEPGPTVSEDGDGHQVNLMVDGDLQSHKARTVNGIVVPTEHETYTEAAKEESGPTISEDSDSHLENQMVDGEIQSYKERVDYDSVMPTEHETDRAEAKEEPCCTISEDSDGHPENQMVDRELHPYKERIDYDNVVPTENETDRTEDKEESFPRISEDSGGHLENAMVDRELEPYKEKIDHDSVVLTEHEIDRTTAKEESGPTISEDSDQYGDAFATNKELEDRNLPNAILPLLRYCQYESSKSSCSFQASPCEDKNFRSDIDDNETEDASFSGQENLNDLNDILEWAMENDHGPLQIICEYYRIGCPSRGSSLTFHSLEHLHPLEYHRPAETVLCRTGSTVDLKSCSTGQELADAQNTLAMEEATSLSVWTTACLCGTLRLENVLTFLAGIVLEKQIVVACSNLGILCASVLSVIPLIQPYRWQSLLMTVLPNDMLEFLDAPVPYIVGIKNMTSEVQSKFTNVIVVDANRNQVTSPTIPQLPRQKELISSLRPYHAALVGESYLGRRRPVYECTEVQIGAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIGSFPYRDRPFMKLFVDTQLFSVHTDIVLSSVQKE* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4616 1023 Gene3D - 794 958 IPR043153 -
Mtr4g4616 1023 Gene3D - 76 289 - -
Mtr4g4616 1023 MobiDBLite consensus disorder prediction 513 542 - -
Mtr4g4616 1023 Pfam uDENN domain 139 216 IPR005113 -
Mtr4g4616 1023 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 487 536 - -
Mtr4g4616 1023 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 438 488 - -
Mtr4g4616 1023 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 536 584 - -
Mtr4g4616 1023 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 586 1023 - -
Mtr4g4616 1023 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 390 438 - -
Mtr4g4616 1023 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 5 390 - -
Mtr4g4616 1023 MobiDBLite consensus disorder prediction 563 586 - -
Mtr4g4616 1023 ProSiteProfiles Tripartite DENN domain profile. 614 1023 IPR037516 -
Mtr4g4616 1023 Pfam DENN (AEX-3) domain 745 895 IPR001194 -
Mtr4g4616 1023 MobiDBLite consensus disorder prediction 373 394 - -
Mtr4g4616 1023 SMART uDENN_cls 85 218 IPR005113 -
Mtr4g4616 1023 PANTHER DENN (AEX-3) DOMAIN PROTEIN 586 1023 - -
Mtr4g4616 1023 PANTHER DENN (AEX-3) DOMAIN PROTEIN 390 438 - -
Mtr4g4616 1023 PANTHER DENN (AEX-3) DOMAIN PROTEIN 5 390 - -
Mtr4g4616 1023 PANTHER DENN (AEX-3) DOMAIN PROTEIN 438 488 - -
Mtr4g4616 1023 PANTHER DENN (AEX-3) DOMAIN PROTEIN 487 536 - -
Mtr4g4616 1023 PANTHER DENN (AEX-3) DOMAIN PROTEIN 536 584 - -
Mtr4g4616 1023 SMART DENN_cls 247 897 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4616 Mtr-Chr4 60162042 60173974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4616 - - mtr:MTR_4g125480 2058.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4616 4 60162042 60173974 Mtr4g4616 4 60162042 60173974 ECH
Mtr4g4616 4 60162042 60173974 Mtr2g1623 2 18311523 18324099 PCT