Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4612 ATGGACCCACCCAATCCCAACGATGTCCCTCCCATTGAGGATATAACTTCTATCACAGAACAACTAAAGGGCCACGGTTTTTCCAACAAAGAAATTGGTGCAATCCTTACCTTAGCCCCATCAACATATGTTCCTGAATCTCCCAATCATATTCATAGAGATGAAAGACCACATGAACCCTTTCTCAAGAGAGGAACGGAACCCGACTCCGATGATGCCTCTTCTTCTAAACGCACAAAACTCTACAACTTTGAAAACACTTCTGATCCAAAAGGAAAGAAACCACTCATTGATGATCATCATCAGAGGAAGGAAATACCAGAAAATCAACTACCTTTGGCTTTTGATATCAATGCTTATAATATTAACAGCGAAACTGAAACTGATGATAGCGACAACGATGATGATTTTGAGATTTGTAGGAACGAGTCATTTATTAGAAGTCAGTACAAGCTATTTAACAAAGACACTGCAAAGAGATTTGCGTCACGCATTCATAGTGTTTCAGAGAATAAAGAAAAAGATGATGATGTGGAACATGAAGTTGATGATGATTCTCCAACTCCTTTCTCTAAAGCAGTCAAAGCTATTCAAGAACGAATTACTAAAAGCAACAAAAGGGGGTTTGTCGATGAATCCCTTACTTGGGTTTCAAAACTGAATGGTGAAGATTTTGTGAGGGGAAGATTATGTGTTCCTTCACTGCTAGAAATGTCTCTTAAAATTCTTGCCAATCATGTTGATGGACTTGCTTCGCTTGATGGTGTTTCTGATGCACTAAAACAAAGGCTTAGCGCGTTGCTTTGTGATTCAAGAAAAATGAATGCTCACTCTCTTGAACTACTTCTAAGTGGATTTCCAAATGTGATTCGGCTTAAAGATTGCTCTTGGATGACAGAGGAAGAATTTACAAAATATTTTGGAAAGTTGGACAATTCCATATTAGAGGTTCTGCAACTTCAGCAATGTGGACGAATTATAACTGAATATACATTACCTTGTACATTGGCAAAGTCACCAAACTGCTTGTCTAGATTGATTAGTCTATCTCTCACCGGTGCATGTCGTCTTTCTGATAAAGGGTTGCAGTTACTAGTTTCTTCTGCAACAACACTTAGATCCATAAATCTAAGCCAATGTTCCCTTCTCACTTTTGCTAGTCTCGATATTTTGGCTGATTCATTAGGATCACTTTTGAAGGAGTTATATCTTGATGATTGTATACTCATTGATGTTGCACTAATTTTATCGGCATTGAAGAGACTCGAACATTTAGAAGTGTTGTCACTAGCTGGACTTCCTACTGTTACTGATAAATTCATCAAGAATTATATCATTACATGTGGTCACAACATTAATGAGCTTGTTTTAAGGGACTGTGTGAATTTGACTGATGCATCAATGAAATTCATTGCTGAACATTGTCCTGAGTTGCATGCACTTGATATTACAAACTTGTGCAAATTGACAGATTTAACCATAAGATATCTTGCAAATAGTTGTCGAGCATTGCTTAATCTGAAGCTATGCCGCAATTCATTCAGCGATGAAGCAATTGCTGCATTTTTGGAGATAAATGGCAAATCCTTGGAAGAACTTTCACTTAATAACATTAAGAAGGTTGGCCAACAAACAAGCTTATCACTTGCAAAGAATGCCAAAAATTTGCATACCTTAGATTTATCATGGTGTCGAAACTTGACAGACAATGAGTTTGGTTTAATTGTCGATAGCTGCTCGTCATTGAGGTTCCTTAAACTTTTTGGATGCTCACAGGTAACAAATGCTTTTCTCAAAGGTCACTCAAACTCAGAGCTTCAGATCATTGGGTTGAAGTTGTGTCCTTTATTGCAGCATATCAAAGAGCCTAATCCTCATCAAAGTGTTTTGCGATATTCATCAGTCTCGCAGTAG 1914 0.3767 MDPPNPNDVPPIEDITSITEQLKGHGFSNKEIGAILTLAPSTYVPESPNHIHRDERPHEPFLKRGTEPDSDDASSSKRTKLYNFENTSDPKGKKPLIDDHHQRKEIPENQLPLAFDINAYNINSETETDDSDNDDDFEICRNESFIRSQYKLFNKDTAKRFASRIHSVSENKEKDDDVEHEVDDDSPTPFSKAVKAIQERITKSNKRGFVDESLTWVSKLNGEDFVRGRLCVPSLLEMSLKILANHVDGLASLDGVSDALKQRLSALLCDSRKMNAHSLELLLSGFPNVIRLKDCSWMTEEEFTKYFGKLDNSILEVLQLQQCGRIITEYTLPCTLAKSPNCLSRLISLSLTGACRLSDKGLQLLVSSATTLRSINLSQCSLLTFASLDILADSLGSLLKELYLDDCILIDVALILSALKRLEHLEVLSLAGLPTVTDKFIKNYIITCGHNINELVLRDCVNLTDASMKFIAEHCPELHALDITNLCKLTDLTIRYLANSCRALLNLKLCRNSFSDEAIAAFLEINGKSLEELSLNNIKKVGQQTSLSLAKNAKNLHTLDLSWCRNLTDNEFGLIVDSCSSLRFLKLFGCSQVTNAFLKGHSNSELQIIGLKLCPLLQHIKEPNPHQSVLRYSSVSQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4612 637 Gene3D Ribonuclease Inhibitor 229 411 IPR032675 -
Mtr4g4612 637 PANTHER UNCHARACTERIZED 131 634 - -
Mtr4g4612 637 SMART LRR_CC_2 501 525 IPR006553 -
Mtr4g4612 637 SMART LRR_CC_2 553 578 IPR006553 -
Mtr4g4612 637 SMART LRR_CC_2 343 368 IPR006553 -
Mtr4g4612 637 SMART LRR_CC_2 369 394 IPR006553 -
Mtr4g4612 637 SMART LRR_CC_2 449 474 IPR006553 -
Mtr4g4612 637 SMART LRR_CC_2 527 552 IPR006553 -
Mtr4g4612 637 SMART LRR_CC_2 475 500 IPR006553 -
Mtr4g4612 637 MobiDBLite consensus disorder prediction 168 189 - -
Mtr4g4612 637 SUPERFAMILY RNI-like 292 614 - -
Mtr4g4612 637 Gene3D Ribonuclease Inhibitor 412 633 IPR032675 -
Mtr4g4612 637 MobiDBLite consensus disorder prediction 42 97 - -
Mtr4g4612 637 PANTHER F-BOX/LRR PROTEIN 131 634 - -
Mtr4g4612 637 MobiDBLite consensus disorder prediction 48 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4612 Mtr-Chr4 60121657 60129781 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4612 K15082 - mtr:MTR_4g125410 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4612 4 60121657 60129781 Mtr2g1629 2 18369443 18375293 PCT