Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4535 ATGGAAGAAGTTAACGTGGTAGAAACTAAGGATGGAACCGTTTCAGTAGCTACTGCATTTGCTGGTCATCAGGAAGCTGTGCAAGATAGAGACCACAAATTTTTAAGAAGAGCAGTCGAAGAAGCATACAAAGGAGTAGATTGTGGAGATGGAGGCCCTTTTGGTGCTGTTATTGTTCACAATGATGAAGTAGTTGCTAGCTGTCACAACATGGTTCTGAATTTTACTGATCCAACTGCTCATGCAGAGGTCACGGCAATAAGAGAGGCTTGTAAGAAGCTTAAGCAGATAGAACTTTCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCCCGAATTAAGAGATTGGTTTATGGGGCGAAGGCAGAAGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCAGATGCATTGCGAGGTACTGGATTCTATCAGAAAGCAACATTGGAAATTAAAAGAGCTGATGGTAATGAGGCCGTCATTGCAGAAGAGGTTTTCGAGAAAACAAAGGCGAAATTCCAAATGTATTAG 561 0.4153 MEEVNVVETKDGTVSVATAFAGHQEAVQDRDHKFLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAVIAEEVFEKTKAKFQMY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4535 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Mtr4g4535 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Mtr4g4535 186 Gene3D Cytidine Deaminase, domain 2 30 185 - -
Mtr4g4535 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Mtr4g4535 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 185 - -
Mtr4g4535 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
Mtr4g4535 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
Mtr4g4535 186 CDD nucleoside_deaminase 35 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4535 Mtr-Chr4 59406145 59409386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4535 - - cam:101506670 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4535 4 59406145 59409386 Mtr2g1740 2 19905412 19907685 PCT