Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4490 ATGACGGTAGTTTCGCTCTTCCTAACTGCCACTAAACTCGCCGGAGCATTAGTCACTCTCACCCTCGCCGCCAATGCCTTCTCCTTCTCTCGTTTTCGCAACAAAAATCTTCGCCGTTTCAATTCCCCCATCGATGAATCCTCCGATACTCTCGCCGATTTCAACATTACCGAAGAAGAAAATGGGTTTTTCTTTGGTCTAGCGACAGCACCGGCGCATGTTGAAGACAGGCTTGATGATGCTTGGATTCAGTTTGCTGAACAAGAGAGTGTTGCCGGTGCTGAGCAGAAAGTAGATGCTTTGATGGGCTCTGCCACTGCTGATGGTGGGTCTCAACAAGCCGTATCATCTGCACAACGAGGGCTTAAGGGTAACAAAAAGTCTCTTAAGGTAGCTATGGAGGCCATGATCAGAGGATTTGAGAAGTACATGGAAGTAGATGGACAGGAAGGAGAAGAAGAAGAAGAACACATTCCTAATGTAACTGCTTGGCATAATGTTCCACACCCGGAGGAGAGATTAAGGTTTTGGTCTGATCCTGATACAGAACTAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGTATGGGAATTGACTGGTCAAGAGTCATGCCTCATGAGCCAGTAAACAGCCTTAAAGAATCTGTCAACTATGCTGCATTGGAGCGCTATAAGTGGATTATCAATAGGGTTCGATCATATGGAATGAAGGTGATGCTTACTCTTTTTCATCACTCACTTCCACCCTGGGCCGGTGATTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGATTTTACCAGGCTTGTTGTTGACAGTGTATCAGATTTAGTAGACTATTGGGTAACATTTAACGAGCCCCATGTCTTCTGTATGCTTACTTATTGTTCTGGAACCTGGCCTGGTGGACATCCTGATATGCTAGAGGCTGCTACTTCCGCACTTCCTACAGGTGTTTTCCAGCAGGCCATGCATTGGATATCTGTTGCACACTCAAAGGCATATGATTACATCCACGAACTCAGTAACTCATCAAATCAAATAGTTGGTGTTGCACATCATGTGTCGTTTATGCGACCCTATGGTCTGTTTGATATTGCTGCTGTTTCACTGGCTAATTCATTGAGTCTCTTCCCATTCATCGATGAAATATCCAAAAAGATGGACTTTATAGGCGTTAACTATTATGGCCAGGAAGCGGTTTCGGGTGCTGGCCTGAAGCTGGTGGAAAATGATGAGTACAGTGAATCTGGACGTGGAGTATATCCTGATGGCTTATATCGCATGTTACTCCAGTTCCATGAAAGATACAAGCATCTAAATGTCCCCTTCATTATTGCTGAAAATGGAATTGCAGATGAGACTGATTTGATCCGTCGACCATATCTCTTGGAGCATTTACTTGCTGTTTATGCAGCTATGATCGAGGGTGTGCCTGTGCTTGGTTACCTCTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTCGCAGTTGACCGAGCAAATAATCTTGCACGGATTCCTCGCCCTTCTTACCATCTGTTTTCTAAAGTTGTAAGTACCGGTAAAGTTACACGTGATGATCGTGATAAAGCTTGGAATGAACTTCAAAGAGCCGCTAAAGAGAAGAAAACAAGACCATTTTATCGGGCTGTGGACAAAAATGGTTTAATGTTAGCAGGTGGACTTGATGAACCCATACAGCGACCTTATATAGAAAGAGATTGGCGGTTTGGTCATTATGAGATGGATGACCTCCAGGATTACTTAAGCCAATTCTCAAGATTCATTATTCAACGATTCTCCCTAAAAAGGAAAAAGAAATCTCAAAAGGAGCAATTAGTTTTGCACTCGCTTTGA 1899 0.4371 MTVVSLFLTATKLAGALVTLTLAANAFSFSRFRNKNLRRFNSPIDESSDTLADFNITEEENGFFFGLATAPAHVEDRLDDAWIQFAEQESVAGAEQKVDALMGSATADGGSQQAVSSAQRGLKGNKKSLKVAMEAMIRGFEKYMEVDGQEGEEEEEHIPNVTAWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRVMPHEPVNSLKESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGDYGGWKLEKTVDYFMDFTRLVVDSVSDLVDYWVTFNEPHVFCMLTYCSGTWPGGHPDMLEAATSALPTGVFQQAMHWISVAHSKAYDYIHELSNSSNQIVGVAHHVSFMRPYGLFDIAAVSLANSLSLFPFIDEISKKMDFIGVNYYGQEAVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIIAENGIADETDLIRRPYLLEHLLAVYAAMIEGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKVVSTGKVTRDDRDKAWNELQRAAKEKKTRPFYRAVDKNGLMLAGGLDEPIQRPYIERDWRFGHYEMDDLQDYLSQFSRFIIQRFSLKRKKKSQKEQLVLHSL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4490 632 Pfam Glycosyl hydrolase family 1 387 534 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 Pfam Glycosyl hydrolase family 1 181 366 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 PANTHER GLYCOSYL HYDROLASE 3 592 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 3 592 - -
Mtr4g4490 632 Gene3D Glycosidases 141 546 - -
Mtr4g4490 632 PRINTS Glycosyl hydrolase family 1 signature 391 405 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 PRINTS Glycosyl hydrolase family 1 signature 448 456 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 PRINTS Glycosyl hydrolase family 1 signature 460 471 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 PRINTS Glycosyl hydrolase family 1 signature 481 498 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 PRINTS Glycosyl hydrolase family 1 signature 505 517 IPR001360 GO:0004553|GO:0005975
Mtr4g4490 632 SUPERFAMILY (Trans)glycosidases 163 540 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4490 Mtr-Chr4 58859052 58864486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4490 4 611 Glycoside Hydrolase AT3G06510 62.171 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4490 K21362 - gmx:100792401 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4490 4 58859052 58864486 Mtr4g4490 4 58859052 58864486 ECH