Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4483 ATGACAATGTTTAAGCCATTTGCATTATTCTTTCTCATCTTGTGCACCTTTCTTGTTGTAACTCAGTCCAGAACTATCCAACCAAACGATGCCAATCTAATTCAACAAACTTGCAAAAACACTCCAAATTATGCACTTTGCATTCAGTACCTAAATTCTGACCCTAAAGCACCTAGTGCAGATATCAGGGGTTTATCATTAATCATGGTTAACGTAATTAAGACCAAAGCAACCGCTACCCTAAACAAAATCCGTCAACTTCTTAAAACGAGTCCTCCTAGTCAAAAGGGCGCACTTACTTCATGTGAGAGTAAATACAATACAATTATTGTAGCTGATGTTGCTGAAGCCACTGAAGCTTTGCAAAAAGGAAACCCAAAATTTGCAGAAGATGGTGCAAGTGATGCTGATGTTGAGCAAGAAGCCTGTGAGGGTGGATTTTCTGGAAATTCACCACTCACTGCTGACAACAACGTCATGCATAATGTAGCAACGATAGCAAGAGCTATTATTCGAAATTTGCTATAG 528 0.3902 MTMFKPFALFFLILCTFLVVTQSRTIQPNDANLIQQTCKNTPNYALCIQYLNSDPKAPSADIRGLSLIMVNVIKTKATATLNKIRQLLKTSPPSQKGALTSCESKYNTIIVADVAEATEALQKGNPKFAEDGASDADVEQEACEGGFSGNSPLTADNNVMHNVATIARAIIRNLL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4483 175 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 13 175 - -
Mtr4g4483 175 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 174 IPR006501 GO:0004857
Mtr4g4483 175 SMART PMEI_2 29 170 IPR006501 GO:0004857
Mtr4g4483 175 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 175 - -
Mtr4g4483 175 CDD CIF_like 31 174 IPR034087 GO:0004857|GO:0043086
Mtr4g4483 175 Pfam Plant invertase/pectin methylesterase inhibitor 32 170 IPR006501 GO:0004857
Mtr4g4483 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 175 IPR035513 -
Mtr4g4483 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 174 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4483 Mtr-Chr4 58805808 58806896 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4483 - - gmx:100306719 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4483 4 58805808 58806896 Mtr4g4483 4 58805808 58806896 ECH